Pseudoliparis swirei (Mariana hadal snailfish): 130208323
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Entry
130208323 CDS
T09868
Symbol
lhfpl5a
Name
(RefSeq) LHFPL tetraspan subfamily member 5 protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130208323 (lhfpl5a)
03037 Cilium and associated proteins [BR:
pswi03037
]
130208323 (lhfpl5a)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130208323 (lhfpl5a)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130208323 (lhfpl5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
130208323
NCBI-ProteinID:
XP_056293342
LinkDB
All DBs
Position
18:complement(28961229..28963020)
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AA seq
232 aa
AA seq
DB search
MLPAQEAAKIYHTNYVRNARAVGVLWTVFTITFSVITVVVFIQPYWIGDSVHTPQAGYFG
LFHYCIGNALTSELTCKGSALDFGSIPSGAFKTAMFFVGISMLLVVGSIVCFSLFFFCNA
GSVYKICAWMQLASSTCMVIGCMIYPDGWDSDEVKRMCGQRTDKYTLGNCTVRWAYILAL
ISIMDSMVLSFLAFSLGSRQDKLLPEDFQVEDKGEGAGRGGEDFQVEDKDNA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggcccaggaggccgctaagatctaccacaccaactacgtgcgtaacgcgcgt
gcggtgggcgtgctgtggaccgtgttcaccatcaccttctccgtcatcaccgtggtggtc
ttcatccagccctactggatcggggacagcgtgcacacgccgcaggccggctacttcggc
ctcttccactactgcatcggcaacgcgctcacctccgagctcacctgcaaaggcagcgcg
ctggacttcggctccatcccgtccggcgccttcaagaccgccatgttcttcgtgggcatc
tccatgctgctggtggtgggctccatcgtctgcttcagcctcttcttcttctgcaacgcc
ggcagcgtctacaagatctgcgcctggatgcagctggcctccagcacctgcatggtgatt
ggctgcatgatctaccccgacggctgggactcggacgaggtgaagcggatgtgcggccag
cggaccgacaagtacacgctgggcaactgcacggtgcgctgggcctacatcctggccctc
atcagcatcatggactccatggtgctctccttcctggccttcagcctgggcagccggcag
gacaagctgctgccagaggacttccaggtggaggacaaaggtgagggggcagggaggggg
ggagaggacttccaggtggaggacaaagataacgcctag
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integrated database retrieval system
