KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208331
Entry
130208331         CDS       T09868                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010  MAPK signaling pathway
pswi04020  Calcium signaling pathway
pswi04218  Cellular senescence
pswi04260  Cardiac muscle contraction
pswi04261  Adrenergic signaling in cardiomyocytes
pswi04270  Vascular smooth muscle contraction
pswi04530  Tight junction
pswi04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130208331 (cacna1da)
   04020 Calcium signaling pathway
    130208331 (cacna1da)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    130208331 (cacna1da)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130208331 (cacna1da)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    130208331 (cacna1da)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    130208331 (cacna1da)
   04261 Adrenergic signaling in cardiomyocytes
    130208331 (cacna1da)
   04270 Vascular smooth muscle contraction
    130208331 (cacna1da)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pswi04040]
    130208331 (cacna1da)
Ion channels [BR:pswi04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   130208331 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C GPHH Ca_chan_IQ PKD_channel
Other DBs
NCBI-GeneID: 130208331
NCBI-ProteinID: XP_056293351
LinkDB
Position
18:14645002..14679547
AA seq 1756 aa
MCCTGEFSKEREKAKARGDFQRLREKQQLEEDLKGYLDWITQAEDIDPDNEDEGEGESKR
NRVTLADLTEKKKKGRFGWFSQSSETHASVPASETESVNTENQNVEEEKTPCCGSLCRRW
RRWNRFCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPTWLTQVQDMANKVLLSM
FTCEMLVKMYSLGLQAYFMLLFNRFDCFVVCGGITETILVELAVMSPLGISVFRCVRLLR
IFKVTRHWQSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDATQTKR
STFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMVVCFYFIILFICGNYILLN
VFLAIAVDNLADAETLNTNNGSKKGVIKEEEKDDKEEEEENDPAAEEEDPEVPSGPRPVI
SDLMKKEKITPIPEGSAFFIFSQTNPFRVFCHKLINHHIFTNFILVFIMLSSASLAAEDP
IRNFSPRNIILGYFDYAFTAIFTVEIVLKMTTYGAFLHKGAFCRNYFNLLDMLVVGVSLV
SFGIQTSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFM
FACIGVQLFKGKFYRCTDEAKSSSEVCKGTYILYKDGDVNQPTLHKRLWHNSDFNFDNVL
KAMMALFTVSTFEGWPSLLYKAIDSNRENLGPIYNYRVGISIFFIIYIIIIAFFMMNIFV
GFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSVFE
YIMFVLIMLNTLCLAVQHHGQSALFNYVMDILNMFFTAVFTVEMVLKLIAFKPRGYFEDP
WNVFDAMVVMGSIVDIVLSEIDHYFADAWNTFDALIVVGSVVDIAITEVNNPEDSARISI
TFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIALLFFIYAVIGMQVFGKV
AMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACISGKLCDPESDYNPGEEYTC
GSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDHE
AKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNGTLFALVR
TALKIKTEEYDSVVSTERPLLPFLFPCGAGNLEQANEELRAVIKKIWKRTSMKLLDQVVP
PAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPTQNNTAIALQAGLRTLHDIGPE
IRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATERPLQVQ
PPPHYAHMEQPVGRLTRANAMSHPNHHHHHHNHHHRHHNSYGKSPKSTNINLNNANASSL
PNGGHHRYYEHAPPNGYPGLRNAYYDKPRTPQGQRRRYYETYVRSHGVDGHHPTIRREEE
FDEDRLSGEYYSGEEFYEDDSMLSGERYPNSDTEYETPKGYHHPENNYDDDEQPLYRDSR
RSPKRRMLPATPQGHRRPSFNFECLRRQSSQDELPHPRTALPLHLMQHQVMAVAGLDSSR
AHHLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDHPHRDSAASSQISVRKSSWYTDDP
EFSQRMHSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIA
DACEMTIDEMESAASHLLNGGIAPSTNGVNVFPLLTPRDYELQDTAASYSDEEPDTEPRA
PYEEDLADEMICITTL
NT seq 5271 nt   +upstreamnt  +downstreamnt
atgtgctgtactggagagttctccaaggagagagagaaagccaaagctcgaggagacttc
cagaggctgcgtgagaagcagcagctggaggaggatctgaaaggttacttggactggata
actcaggctgaagacatcgaccctgacaacgaggacgagggcgaaggggagagcaagcgc
aaccgggtgactctggctgaccttactgagaagaagaagaaaggaaggtttgggtggttc
agccagtcgtccgaaactcatgcgagcgttccagccagtgaaacagaatccgtgaatacc
gagaatcaaaatgtggaggaagaaaaaacaccatgctgcggatctctgtgtcgacgctgg
cgccgctggaacaggttctgccgcaggaattgccggttggctgtcaaatcggtgcctttc
tattggctggtcatcatcctggtgttcctcaacacactcaccatatcatcagagcactac
aaccaacctacgtggctgacacaagtgcaggacatggccaacaaggtgctgctctccatg
ttcacgtgtgagatgttggtgaagatgtacagtctcgggctccaggcctactttatgtta
ctgttcaaccgctttgactgctttgtggtttgtggaggaatcacggaaaccattctggtg
gagctggcagtcatgtctcctctcggcatctctgtgttccgctgcgtccgcctgctgagg
atctttaaggtcacgcgtcactggcagtctctaagcaacctggtggcgtctctgctcaac
tccatgaagtccatcgcttctctgctgctgctgctcttcctctttatcatcatcttctcc
ctgctgggcatgcaggtgttcggtggaaagttcaactttgatgcgacccagaccaaaagg
agcaccttcgacaactttccccaggcccttctcactgtgtttcagatcctgaccggagaa
gattggaacgccgttatgtacgatggcatcatggcgtacggagggccttcctcttctggg
atggttgtgtgcttttacttcatcatcctcttcatctgtggaaactatatcctcctgaat
gtcttcttggctatcgctgtggacaacttggcagatgctgagactctcaacacaaacaat
ggaagcaagaaaggggtgataaaggaggaggaaaaagatgacaaggaggaggaagaggag
aatgaccctgcggcggaggaagaggatccagaagtcccatcggggcctcggccggtcatc
tctgacctgatgaagaaggagaagatcactcctatcccagaaggaagcgccttcttcatc
ttcagccaaacaaacccgtttcgtgtgttttgccacaaactcatcaaccaccacatattc
accaacttcatcctggtcttcatcatgctcagctccgcctcactcgccgccgaggatccg
atccgtaacttctcacctcgcaatattatacttggttactttgactatgctttcacggct
atctttactgttgagatcgtattgaagatgacaacatatggagcctttctccataaaggg
gcattctgtaggaattacttcaacctcctggacatgttggtggtgggagtttccctcgtt
tcctttggcattcagacctcggccatctctgtggtgaagattcttcgggtcctccgtgtt
cttcgacccctgagggccatcaaccgagccaaaggcctgaagcacgtggtgcagtgcgtg
tttgtggccatcagaactatcggtaacatcatgatcgtcaccaccctgctccagttcatg
ttcgcctgcataggggtgcagctgtttaagggaaagttctatcgctgcacagatgaagcc
aagtccagctcagaagtgtgcaagggcacctacatcctgtataaggatggagatgtgaac
cagccgacccttcacaagcgattgtggcacaacagtgacttcaactttgacaacgtcctc
aaggctatgatggcgctgttcactgtgtccacttttgaaggctggccttctttactgtac
aaggcaatcgactcaaacagggagaacctgggtcccatctacaactaccgcgtggggatt
tccatcttcttcatcatctacatcatcatcattgccttcttcatgatgaacatctttgta
ggttttgtgatcgtcacatttcaggaacaaggagaaaaagagtacaaaaactgtgagctc
gacaagaaccagcgtcagtgtgtggagtacgcgctaaaggcgcgtccactgaggaggtac
atccctaaaaacccgtaccagtacaagttctggtacgtggtgaactccagtgtgtttgag
tacatcatgtttgtgctcatcatgctcaacacgctctgcctggctgtgcagcaccacgga
cagtcagcactctttaactacgtcatggacattctcaatatgttcttcacggctgtcttc
actgtggaaatggttctcaaactcatcgctttcaagcccaggggctattttgaagatccc
tggaatgtgttcgacgccatggttgtgatgggcagcatagtagacattgttctcagtgag
attgatcactatttcgctgatgcttggaacacatttgatgccttaattgttgtcggtagc
gtcgtcgatattgctatcactgaagttaataacccggaggacagtgctcgcatctccatc
accttctttcgtctgtttcgagtcatgcggctggtcaagctcctcagcaaaggggagggc
attcgcaccctgctttggactttcatcaaatcatttcaggcgctgccatatgttgctctt
ctgatagccctgctgttcttcatctacgccgtcattggcatgcaggtgttcggaaaggtt
gccatggtggacggcacacacatcaacagaaacaacaacttccagaccttccctcaggct
gtgctccttctcttccggtgtgccactggagaggcctggcaggagattatgttggcctgc
atatcagggaaactgtgtgacccagagtccgactacaaccccggggaggagtatacgtgt
ggcagtggatttgcaatcatttacttcatcaccttctacatgctctgcgccttcttgatt
atcaatttgtttgtggcagtcatcatggacaactttgattatctaacacgtgattggtcc
attcttggtccacaccaccttgatgaattcaagagaatttggtcagagtacgaccatgag
gctaagggcagaattaaacatctggatgttgttacacttcttcgtcgtatccagcctcct
ctcggctttggaaaactgtgccctcacagagtggcttgcaagaggttggtagccatgaac
atgcccctgaacagtgacggcactgtcatgtttaacggcactttgtttgcactggtgcgc
actgccctgaagatcaaaacagaagaatacgattctgtcgtatccaccgaacgtcctctg
ttgccctttttatttccctgcggtgcaggtaatctagagcaggccaacgaagagctgcgc
gctgtcatcaagaaaatctggaagaggaccagcatgaaactgctcgaccaagtagtgccc
cctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggac
tactttaggaaattcaagaaacgtaaagaggaaggtctggtgggtgctcacccgacgcag
aacaacacagctatcgctttacaggctgggcttcgcacgctgcatgatattgggcccgaa
attcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttattccagag
gaagacgaggaaatttataggcgtaacggtggactcttcggtaaccatctcatgaacggt
ggccatcgccgatccaacggccaccagaccaacgcaacagagcgacctctgcaggtgcag
cctccacctcactacgcccatatggagcagccggtgggacgcctgactcgagccaacgca
atgtcccaccccaaccaccatcaccaccaccacaaccatcaccaccgccaccacaactcc
tacggaaagtctcccaaatccaccaacatcaacctcaacaacgccaacgcttccagtctg
cccaacggaggacaccatcgttactatgaacatgcacctcccaatggctacccaggtctt
cgcaacgcctactacgacaaaccacggacaccgcagggccaaagaaggcgctactatgag
acctatgttaggtctcacggagtagatggacaccaccccaccatccgcagggaggaggag
tttgatgaagaccgcctttctggggagtattacagcggggaggagttctatgaagatgac
agtatgctgtcaggagaaaggtatccgaacagtgacacggagtacgagactcccaaaggt
taccatcaccctgaaaataactatgacgatgacgagcagcctctctaccgcgactcacgg
cggtcaccaaagagacgaatgcttcctgccacgcctcaaggtcacagaaggccatcgttc
aactttgagtgtctgcgcagacaaagtagccaggacgagcttccacatccgcgtactgct
ctaccactgcaccttatgcagcaccaggttatggctgtagcaggcctggactccagcaga
gcccaccacctctccccaacccgctccacccgctcctgggccacgcctcctgccacaccg
gccagtaaagatcagtcaccgtattacacccctctcatccgtgtggaccacccacacagg
gacagcgctgctagcagccaaatatctgtgcgcaagagctcctggtacacagatgacccc
gagttctcccagaggatgcactcacctgtccacctgcaggtgccacctgaataccacaac
cagtaccaccagaagagaggcagcgccaccagccttgtggaagcggttttgatatcagaa
gggcttgggagatatgccaaggatcccaagtttgtcgctgccacaaagcacgagatagca
gatgcatgtgagatgacaatagatgagatggagagtgccgccagccacctgctgaatgga
gggatcgccccgagcaccaacggggtcaacgtgttccccctgctgactccaagggactat
gagctgcaggacactgcagccagctacagcgacgaggagccagacacagaacccagagct
ccttatgaggaggacctggcggacgagatgatctgcatcacgactttatag

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