KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208345
Entry
130208345         CDS       T09868                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130208345 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130208345 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pswi03021]
    130208345 (ell2)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130208345 (ell2)
Transcription machinery [BR:pswi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130208345 (ell2)
    Little elongation complex (LEC)
     130208345 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL FapA
Other DBs
NCBI-GeneID: 130208345
NCBI-ProteinID: XP_056293386
LinkDB
Position
18:28095629..28111663
AA seq 713 aa
MLQPQRDDGGGLVKMAALSEDGRYGLNCGRQSTDRVTVLHVKLTETALRAIDSHQNCMNV
PPQQPTIQFKGLQGCIKIPKTDSTSDTFHNFDFYLSNVGKDNPQGSFDCIQQYVSSSGAS
HLALLGTVQDKVTVCATNDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKQVHSRKPA
LSGTDVVPERKRSTPINPANTIRKCLANNPVSQRPFRDRLIHLLALRPYKKLEVMARLQR
DGINQKDRTSMGTTLQQVANINPKDNTYSLKDFIYRDIQRDWPGYSDDDKTQVDRILARK
LGLPIETLPSSSSPKDVVPTSPQKRPADFDFIDPLAPKKARISHLSNRGPASSSSSSEQR
REDEGGGSPGAKRTSLPAHVASGPPPPHLPVPSHPPAPSHQQPSPASHSNSPSTPEGCGT
QDLPIDQSSSCRDPSPSPSSSDRTPQDHYRHPVSVPTPTASPSPPPPAPPPPLVIPPCTS
LTVTSTVITSPPLSSTTSKKFKKKSKKHKDKDRQREKGKRTEKSSRSPPLPLPLPPPPPP
AAVIIQAELAEEPRRAKKKRSAEEETTRDVINKHPPKDPGPSDKEKPVQASEFSPTTEMP
DYVVKYMPMVSMDQRQSYKDDFNAEYDEYRQLHARVENITRRFTELDAKCRKLPPGTKEY
QKVQEEVVKEYKKMKQHSPNYHEEKQRCEYLHNKLAHIKRLIADFDQSRVPWC
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgctccagcctcaaagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggaggtatggattaaactgtggccggcagagcaccgacagagtcaccgtgttacac
gtcaaattgacggagacggcgctgagagccatagacagccaccaaaattgtatgaatgta
ccaccacagcagccgaccatacaattcaagggactccaagggtgcattaaaattcccaag
acagattccacctcagacaccttccacaattttgatttctacctgtctaatgtgggcaag
gacaaccctcagggaagctttgactgcatccagcagtatgtgtccagctcaggggcctca
cacctggcattgttggggacggtacaggacaaggtcacggtgtgtgccacgaacgactcc
taccaggtgacccgggaacgcatgacgcaggccgccgaggacacgcgtgaacgtgggacc
aaagtcatcaagcccggtggccagtacagaggaaagcaagtccatagccgtaagccggcg
ctgtcggggacagacgtggtcccggagcgtaagcgctccacgcccatcaacccagccaac
accatccgcaagtgccttgccaataacccggtgtcccagcggcccttcagggaccggctc
atccacctgctggcgctccggccctacaagaagctggaggtgatggcccgtctgcagcgg
gacggcatcaaccagaaggaccgcacgtccatggggaccaccctgcaacaggtggcgaac
attaaccccaaagacaacacgtactcgttgaaggactttatttatcgtgacatccagcgg
gactggcccggctactccgacgatgataagacgcaggtggaccggatcctggctcgtaaa
ttaggtcttcccatcgagaccctcccatcaagcagttctcccaaagacgtggtccccaca
tcgccccagaagcgcccggcggacttcgacttcatcgaccctctggctcccaagaaggct
cgcatctcccacctcagcaaccgcgggccggcctcttcgtcttcgtcctccgagcagcgc
cgcgaggacgagggcggcggcagccccggcgccaagcgcacgtccctgcccgcccacgtc
gcctcgggcccccctcccccccacctgccggtcccgtcccacccccccgctccctctcac
cagcagcccagcccggcctcccactccaactcgcccagcaccccggagggctgtggcacc
caggacctgcccatcgaccagagctcctcctgcagggacccttcgcccagcccctcctcc
tccgataggaccccgcaggaccactatcggcaccccgtctccgtccccacgccgaccgcc
tcccccagcccccctccccccgccccgccccctcctctcgttatccctccttgcacctcg
ctcacagttacctccaccgtcatcaccagcccccccctgtccagcactaccagcaagaag
ttcaaaaagaaatccaagaagcacaaagataaggatcgccagagggagaaagggaaacgg
accgagaagagtagcaggagtcctcctcttcctcttcctcttcctcctcctcctcctccc
gccgccgtcatcatccaagcggagctggccgaggagccgaggagagccaaaaagaaacgc
agtgcagaagaagagacgaccagagacgtgatcaacaagcaccctccaaaggatccaggc
ccttcagataaagagaaaccagtccaagcctctgaattctcccccacaacagagatgccc
gactacgtcgtgaagtacatgcccatggtgtccatggaccagaggcagagctacaaggac
gacttcaacgccgagtatgacgagtatcgccagctacacgcccgggtggagaacatcacc
cgccgcttcaccgagctggacgccaagtgccggaagctgccacccggcaccaaagaatac
cagaaggtgcaagaagaagtggtgaaagagtacaagaagatgaaacaacacagccccaac
taccacgaggagaagcagcgctgcgagtacctgcacaacaagctggcccacatcaagcgg
ctaatagccgatttcgaccagagccgagtgccgtggtgctga

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