Pseudoliparis swirei (Mariana hadal snailfish): 130208365
Help
Entry
130208365 CDS
T09868
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130208365 (yod1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130208365 (yod1)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C88
130208365 (yod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
130208365
NCBI-ProteinID:
XP_056293417
LinkDB
All DBs
Position
18:complement(5296091..5301023)
Genome browser
AA seq
303 aa
AA seq
DB search
MLHLRCKTKNGSHIMQGLTHQSCVQELKRKVEELTGIPCDVQKIMVGYPPSSLDLQNGDA
HLKDYPIKSGDTLIVEEEKNKPKPPPDHPAVTKAPRPEASPALTRRVVPADNSCLFTSVN
YVVEGGVYDLACAPEMRGLIAQIVSSDPAAYSEAVLGKTNEEYCAWIRRDDTWGGAIEVS
ILSKFYQCEICVVDTQTVRVDRFGEDAGYRKRVLLIYDGIHYDPLQKETPGADAAPPLTI
FSTADDVILALALELADEARRKRQFTDVNRFALRCMVCETGLVGQKEAREHAKETGHTNF
GEV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcttcgctgtaagaccaaaaatggcagccacatcatgcagggcttgactcat
cagtcctgtgtgcaagagctgaagaggaaggtggaggagctgactggaatcccctgtgat
gtgcagaagattatggttggttatccaccctccagccttgaccttcaaaatggagacgct
cacctcaaggactaccccatcaaatcaggagacaccctcatcgtcgaggaagaaaagaac
aagccgaagcctcctccggatcaccccgccgtgaccaaagcgccgcgcccggaagcctcg
cccgcgctgacccgccgagtggtgccggcggacaactcctgcctcttcaccagcgtgaac
tacgtggtggagggcggcgtgtacgacctcgcctgcgcccccgagatgcgaggcctcatc
gcccagatcgtgtcgagcgacccggcggcgtactccgaagcggtgctgggcaagaccaac
gaggagtactgcgcctggatccgacgcgacgacacctgggggggcgccatcgaggtgtcc
atcctgtccaagttctaccagtgcgagatctgcgtggtggacacccagacggtgcgcgtg
gaccgcttcggcgaggacgccggctaccgcaagcgcgtgctgctcatctacgacggcatc
cactacgacccgctgcagaaggagacgcccggcgccgacgccgcgccgcccctgacgatc
ttctccaccgcggacgacgtgatcctggcgctggccctggagctggcggacgaggctcgc
cgcaagcgccagttcacggacgtcaaccgcttcgcgctgcgctgcatggtgtgcgagacg
ggcctggtgggacagaaggaggcccgggagcacgccaaggagacgggccataccaacttt
ggggaagtgtga
DBGET
integrated database retrieval system
