Pseudoliparis swirei (Mariana hadal snailfish): 130208385
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Entry
130208385 CDS
T09868
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130208385
G protein-coupled receptors [BR:
pswi04030
]
Rhodopsin family
Vision
Opsin
130208385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
Serpentine_r_xa
7tm_4
Motif
Other DBs
NCBI-GeneID:
130208385
NCBI-ProteinID:
XP_056293446
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All DBs
Position
18:complement(14679702..14682734)
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AA seq
338 aa
AA seq
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MQPSVYFLNASYYVGPHEEPALSRTGFIMLSIIMAIFTGPAIILNATVIIVSLMHKQLRQ
PLNYALVNMAVADLGTAMTGGVLSVVNNAQGYFSLRRTGCVMEGFSVALFGITSLCTVAL
IAVERMFVVCKPLGQILFQKKHAVRGIALSWSWSLTWNLPPLFGWGRYELEGVGTSCAPD
WDNRDPQNVSYILAYFAVCFAVPFALILASYTKLMWTLHQVSKMACLEDGAVAKEERKVA
SMVVLMVLTSMISWLPYAGLAMLVVYNPDVEVHPLVGTVPVYLAKSSTVFNPVIYIFLNK
QFRKYAVPFLLCGKEPSLDDEASEATTAVEVANKVSPA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccatcagtttatttcttaaatgcttcttactatgtgggtccacatgaggaaccc
gctctgtcacgcactggcttcatcatgctctccatcattatggcaatttttaccggtccg
gccatcatcctcaacgctacggtgatcattgtgtccctcatgcacaagcagctgaggcag
ccgctcaactacgctctggtgaacatggctgtggcggacctgggcacagccatgaccgga
ggggtgctgtctgtggtcaacaacgcccaggggtacttctccctgcgaagaaccggctgc
gtgatggagggcttttcagtggccctgtttggcatcacatctctatgcacagttgctctg
atcgcagtggagaggatgtttgttgtgtgtaagcccttggggcagatactcttccaaaaa
aagcatgcagttagaggtattgccttgtcctggtcgtggtccctcacgtggaacttaccc
cccctgttcggctggggcaggtatgagctggagggcgttgggacgtcctgtgcgcctgac
tgggacaaccgggaccctcaaaacgtctcctacatcctagcttactttgctgtgtgcttt
gcagttccctttgcacttatcttggcatcctacacaaagttaatgtggacattacaccag
gtgtcaaagatggcctgtcttgaagatggtgcagtagctaaagaagagagaaaggtggcg
tccatggtggttctgatggtgctgacctctatgatcagctggttgccctatgccggcctg
gccatgctggtggtctacaaccctgatgtggaggtccacccgttggtgggcacggtgcct
gtttacctggccaagagcagcactgtgttcaaccctgtcatctacattttcctcaataaa
cagttccgtaagtacgcggtacccttcctgctgtgtgggaaagagccgtcgctggacgat
gaggcctcagaggcaacaacagccgtagaggttgccaacaaagtgtctcctgcttga
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integrated database retrieval system
