Pseudoliparis swirei (Mariana hadal snailfish): 130208386
Help
Entry
130208386 CDS
T09868
Symbol
itga7
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-7
KO
K06583
integrin alpha 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04518
Integrin signaling
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130208386 (itga7)
04518 Integrin signaling
130208386 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130208386 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130208386 (itga7)
04810 Regulation of actin cytoskeleton
130208386 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130208386 (itga7)
04515 Cell adhesion molecules [BR:
pswi04515
]
130208386 (itga7)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130208386 (itga7)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130208386 (itga7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
130208386
NCBI-ProteinID:
XP_056293447
LinkDB
All DBs
Position
18:complement(10906190..10938929)
Genome browser
AA seq
1126 aa
AA seq
DB search
MAAPVGHGNTVSLSSCSSHRWTSLLWALLTLSSQVWGFNLDITHTLHKLGDRGTFFGFSL
ALHQQLNPEPQSWILVGAPQAAGQGQLRGSRPGALFKCPITPEEYDCERVDIDGEVNLNK
ESKDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVNKPAETRDPIGRCYVLSDDLTERDDL
DGGEWKFCEGRPQGHEQFGFCQQGLSVSFSPDNNFILFGAPGTYNWKGEMRVQLLNQTLL
DLGFYDDGPYEVADQKQLNAQLIPVPSHSYLGFSVDSAMGIMSLGELTFVAGAPRANHTG
AVVLLRKDNVYRLVPQHIFWGEELASSFGYSVATADLNNDGWTDLIVGAPNFFDRKAEIG
GAVYVYLNPFGHWDDQARPIRLNGTYDSMFGITVSNIGDLDQDGYGDIAVGAPFDGDGKV
FIYRGSDSGIETKPAQVLDGRDFDVRCFGYSISGGLDIDHNHYPDIAVGSLNDSVVLFRS
RPVIHVIRDISIDPQFIDLEQYNCKGREGVCMEVKACFTFTAHPEHYSPHITLVVHFEAD
TERRKLGLPHRVNFLGRSSLEPEYTQIEEVELHRQRHPVCTTATFQLHENIRDKLRPISL
AITHTIKRVPPRRHSGAKRLEKLAPVLSVSSSNTLHSEVNFLREGCGSDKICQSNLKLSY
QFGTRHLASDLFTPLPKDEDDVQVFSLSDQRLVVLEISVTNIPSDPLLPEEDGDDAHAAQ
LLISLPDSLSYAGSRIPEQMRCQVNPNGSQVECDLGNPVKRDNKLKFSINLSTSNITIET
TELTADLLLTTISEQPELPPVTAFAKVVIELPLSVSGFARPHQLFFSGVVXGESAMTSLE
DIGSPVDFEFVVANPGQALQMLGSAFLNIMWPYGLANEKWLLYPVSLKFEGHPDTQCTST
GGLNTLNLLSSSSAEPPQPANHKAGRTRRSYPEEEGLVATKGNMGRTTPAVAASERRKSL
KLDCLLGSARCVLFQCPLHSFSGHAVLKIHARLWNSSFIEEFAAVSALELLVRANITVKS
SIKHLLLKNAAAQVPVMIYPEPGLTDQYRIPWWIILIAVLAGMLLLTLLVCILWKCGFFQ
RAHYKDKLPQYHAVKIPREDRPQFHTEKSGVVHKKDWATHWSDGTS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccggtgggacatgggaacaccgtctctctctcgtcttgctcctctcatcgt
tggacttccctcctctgggctctgttgaccctttcaagccaagtgtggggctttaatctg
gatattactcacacactgcataagttgggagaccgtggcacattttttggtttttctcta
gccctccaccagcagcttaaccccgagcctcagagctggatcctggtgggggcgccacag
gcagcagggcagggccaactgaggggcagccggcccggagctttgttcaagtgtccaatc
acaccggaggagtacgactgtgagagagtggatattgatggagaagtgaatctgaacaaa
gagagcaaagacaaccagtggctgggagtcactgtgaagagtcaggggattggagggaag
gtggtgacctgcgctcacctgtatgagctcaggcaacgcgtcaacaaaccggcagagact
cgcgaccccatcggacgctgctacgtcctcagtgacgatctgaccgagcgagacgacctg
gacggaggggagtggaagttctgcgagggccggccgcagggacacgagcagtttggcttc
tgtcagcagggactgtccgtcagcttcagcccggacaacaacttcattctgttcggggct
ccgggaacttacaactggaaaggggagatgcgcgtccagctcctaaaccagactctgctt
gacctcggtttctatgacgacgggccctacgaggtggcagatcagaaacaacttaatgcc
cagctcatccctgtgccctcccacagttacctggggttttccgtggactcggccatgggg
atcatgagcctcggggagctgaccttcgtggcgggtgcacctcgagccaatcacacgggg
gcagtggtgctgctgaggaaggacaacgtgtaccgactagtgccacagcacatcttctgg
ggggaggagctggcgtcttcgtttgggtactcggtagctacggcggatctaaacaatgac
ggatggacagatttgattgttggagctcctaatttctttgaccgtaaggcagagattggt
ggagcggtgtatgtgtacctgaaccccttcggtcactgggacgatcaggctcggcccatc
aggctcaacgggacatacgactccatgtttggaataacagtcagcaatataggagatctg
gatcaggacggatacggagatatcgctgtgggggccccgtttgatggagatggcaaagtt
ttcatctacagaggctcagattctggaattgaaacaaaaccggctcaggtgctggacggt
cgtgactttgatgtgagatgttttggatactccatctcaggtggtttggatatcgatcat
aaccactaccctgatatagcggtgggctctcttaatgactcagtggttctcttcaggtct
cgcccagtcatccatgtgatcagagatatatctatcgaccctcagttcattgatctggaa
cagtacaactgcaagggcagagaaggagtctgcatggaggtcaaggcctgcttcaccttc
acggcccacccagaacactactcaccacacattacacttgtggtgcacttcgaagctgac
acagagcgcaggaagttgggcctcccgcaccgcgttaacttcctgggccgcagttccctg
gagccggagtatactcagatagaagaagtggagctgcatcggcagcgtcaccccgtgtgc
accaccgctaccttccagctccatgagaacatccgtgacaaactgcgtccgatctcactg
gcgataacccacaccatcaagcgtgtgccaccgcgcagacactcaggtgccaagaggctg
gagaagctggctccggtgctgagtgtttcctcgtcgaacacgctgcactctgaggtgaac
ttcctacgagaaggatgcggcagcgacaaaatctgccagagcaacctgaagctgagctac
cagtttggaacgcgacacctggcctctgacctcttcacccctctgccaaaagatgaggat
gatgtgcaggtgttctccttgtcagaccagcggttggtggtgctggagatcagcgtcacc
aacataccctccgacccgctgctccctgaggaggacggagacgacgcccacgctgcccag
ctgctcatctcccttccagactctctgtcgtacgccggctccaggatccccgaacagatg
agatgccaagtgaacccgaatggctctcaagttgaatgtgacctgggaaaccctgtgaaa
cgagacaataagctgaaattctccatcaacttgagtacatctaacatcacaattgagacc
actgagttgacagcagatctcttattgacaaccatcagtgagcagcctgaactgccaccg
gtcacagcttttgctaaagttgtgatagagctccctctgtctgtcagtgggtttgctcgt
cctcaccagctgttcttcagcggggtggtgnaaggagagagtgccatgaccagtctggag
gacatcggcagccctgtggattttgagtttgtggttgctaatcctggccaagctctgcag
atgctcggctcggccttcctcaacatcatgtggccttacggactggccaatgagaaatgg
cttctgtatcctgtcagcttgaagtttgagggccacccagacacacagtgcacctcgaca
gggggcttgaatactttaaacctgctcagctcctcatctgcagaacctccacagcctgcc
aatcacaaggctgggcgaacgcgccgttcctacccggaggaggaaggtctagtggcgaca
aaaggcaacatggggcgaaccaccccagctgtggcagcttcagagagacgcaagtcgctc
aaactggactgtctcttggggtcggcacgctgcgtcctctttcagtgccccctccacagc
ttctccggtcatgctgtcctcaagatccatgccaggctgtggaacagcagcttcatagag
gagtttgcagcagtcagtgccctggagctgctggtcagagccaacatcactgtgaagtcc
agcatcaaacacctgctcctcaagaatgctgccgctcaggtgccggtgatgatttatccc
gagcctggtctgactgaccagtaccggattccctggtggatcatcctcatagccgtgctg
gcgggcatgctgctgctgactctgttggtctgcatactgtggaagtgtggcttcttccaa
cgggcccactacaaagacaaattgcctcagtaccacgcggtgaagattccccgcgaggac
cggccacagttccacactgagaagtcaggagttgtccataaaaaggactgggccacgcac
tggagcgacgggacctcgtaa
DBGET
integrated database retrieval system
