Pseudoliparis swirei (Mariana hadal snailfish): 130208412
Help
Entry
130208412 CDS
T09868
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04217
Necroptosis
pswi04622
RIG-I-like receptor signaling pathway
pswi04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130208412 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130208412 (cyldb)
04625 C-type lectin receptor signaling pathway
130208412 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130208412 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130208412 (cyldb)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130208412 (cyldb)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C67
130208412 (cyldb)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130208412 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DUF5839
Motif
Other DBs
NCBI-GeneID:
130208412
NCBI-ProteinID:
XP_056293490
LinkDB
All DBs
Position
18:complement(25636454..25642189)
Genome browser
AA seq
720 aa
AA seq
DB search
MEPGAGVGEKFFIVVRGKSRKGFCRGCVGRVQAELQPGELTGLLYGSRDSNAGSPKSGGT
VRREDTYPLTRHQAQLLLFVSSASKRLELLCNPQLFAAVCEVSSGDLVLVKHKKGHLPAV
VKNLMQIGKKEDKGDLQIGRKEDKDYLHLIGFQVEFVDSDPNLSSKKPPPLALFSASDII
QVVPSYSVPPDLQRKEVQSGSLNRTGVKHLNPTPNTEAPPRQVRKSRTRQSIQSRRSSTP
LEVGSMVEVVSNSGLTVYGVVQWLGVPEGKTDKWSGIELEYDVKGCSDGTCGGQRYFTCK
GGRALFVPAKKCKPDGRFVCTSPEKKNLNPDDAPPVPPFEESEEDAPPIPESEALSLLVG
RMKGIQGHINSCYLDATLLSLFSTSVTLDNICRRSADAEKPVTCTLRKIVNRLRRQGFVP
AESVMNFRKELGCDTFRTEEKDPEEFITVLFQNVLCMEPLLKLRSGQETCQGAYTFQIFL
EKDQMGPMPTVQQLLDTSCLSGDLKFEETPSCLMVQMPRFGNKYKMFSHIIPSTELDITD
LLYNSPRECFICGHLAEYECLQCLPDRKLQPGRIKQYCSTCNAQVHTHPSRQGHTAKALV
VPADAASDSPVRRHTMQLFAVLCIQTSHYVSFVKCGPDTHSWLFFDSMADRCGDDHRGYS
IPVIRACPELGDFLSRPEEELACSNPSQAPELVCRLLCDSYMFLYQNPAAPILTPNQQES
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcgccggagtgggggagaagtttttcatcgtggtccgcggcaagtcgagg
aaaggcttctgccggggctgcgtgggccgcgtgcaggcggagctgcagcccggggagctg
acggggctgctgtacggcagcagggacagcaacgccgggagccccaagagcggaggcacc
gtgaggcgggaggacacgtacccgctgacccgccaccaggcgcagctgctgctcttcgtt
tcctccgcgagcaaacgcctggagctgctgtgcaacccacagctgttcgcggccgtctgc
gaggtgtcatcgggtgacctggtgttggtgaagcacaagaagggccacttgcccgcggtg
gtgaagaacctgatgcagattgggaagaaggaggacaaaggcgacctgcaaattgggagg
aaggaggacaaagactacctgcacttgatcggcttccaggtggagtttgtggacagtgat
cccaatctgtcatccaagaagccccctcctctcgccctgttcagtgcgtcagacatcatc
caggtggtcccgtcttactccgttccccctgatctgcaacggaaagaagtccaatctggg
agtttgaacagaaccggggtgaagcacctcaatccaacgccgaatacagaagctcctcca
cggcaagttagaaagagccgtacacggcagagcattcagagccgccgttcaagcacacct
ctggaggtgggctccatggtggaggtggtgtccaactcggggctcacggtgtacggggtc
gtccagtggttgggggtcccagaagggaagactgataaatggtctgggattgaattggag
tacgatgtgaagggctgctctgatgggacttgcggaggccagaggtatttcacctgcaaa
ggtggcagggcgttgtttgttcccgccaagaagtgcaaacctgacggcaggttcgtctgc
acgtcgccagaaaagaagaacctcaaccccgacgacgcacctccagttcctccttttgag
gagtctgaggaggatgcgcctcctattcctgaatccgaggccttgtctttgttggtggga
cgaatgaaagggatccagggtcacatcaactcctgttacctcgatgccacgctcttgagt
ttgttcagtacatccgtgaccctggacaacatctgcagaagatctgctgacgcggagaaa
cccgtaacctgcaccctgagaaaaatagtcaaccgtttgcgcagacaagggtttgtccct
gcagagagtgtcatgaatttccgcaaagagcttggctgcgacaccttccgaacagaggag
aaagacccggaggagttcatcacggtcctcttccagaacgtgctttgcatggagccgctg
ctcaagctcagatcgggccaagaaacttgtcagggtgcctacaccttccagatctttctg
gaaaaagatcagatggggccgatgcccaccgtccaacagctgctggacacatcctgcctg
tcgggtgacctcaagtttgaagagacgccgtcctgtctcatggttcagatgccgaggttt
ggaaacaagtataagatgttttctcacataattccctccactgagcttgacatcacagat
ctcctatacaactctccaagggaatgcttcatctgtgggcatctggctgagtacgagtgt
cttcagtgtctgccagatcgcaagctgcagccagggaggataaaacagtactgctctacc
tgcaacgcacaggtgcacacccatccctcacggcagggtcacaccgccaaagctctcgtg
gtgccagcagacgcagcctctgattctccggtgcgcaggcacacgatgcagctgtttgct
gtgctctgcattcaaaccagccactacgtgtcctttgtcaagtgcggccccgacactcac
tcctggctcttctttgacagcatggcagaccgatgcggtgacgatcaccgtggctacagc
attcctgtgatccgagcgtgtccggagttgggtgacttcctgtcccggccggaggaggag
ctggcttgttctaacccctcccaggcgcctgagttggtgtgcaggctgctgtgcgactcg
tacatgtttttataccaaaacccagccgcgccaattttgacgccaaaccagcaggagtct
tag
DBGET
integrated database retrieval system
