Pseudoliparis swirei (Mariana hadal snailfish): 130208460
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Entry
130208460 CDS
T09868
Symbol
cntn4
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130208460 (cntn4)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Contactins
130208460 (cntn4)
BRITE hierarchy
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
C2-set_2
Pur_ac_phosph_N
Tissue_fac
C2-set
Interfer-bind
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
130208460
NCBI-ProteinID:
XP_056293585
LinkDB
All DBs
Position
18:complement(23547720..23718902)
Genome browser
AA seq
1028 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAESGVVQSPVFSKQPGSIVYPVETGEKSREVVFSCEAQGSPPP
IYRWKLNGTEISPRSGTHYSLSGGNLRISHLNKDQDAGTYQCLASNAFGTIVSREARLTF
AYMENFKIHRRSSVSVREGQGVVLLCGPPSHSGDLVFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVKPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPVPSIKWKRVDGVPFPRKVDMRKASGILEIPYFQQEDAGTYECV
AENSRGLNTVKGKLSFYAPPHLIEKPQDAQKLIDDSLVWECKATGKPKPSYRWMKNGENL
EPAEERIQVANGGLSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAIAPDFSHNQLRS
QTLVKVGGDVLIECKPKMSPWGVISWRKGSEMLRESNRVFILDNGNLRVWNATKSDVGLY
TCVARNQFGVASSTGSVTVKEPTAITTLPSTLDITVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGSHGGYFEKVGGHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRGP
PGPPTSLHVEEITDTTAPLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEMVGGHR
LTATVIDLSPWVEYEFRVLAGNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSEL
VITWEPVPEEQQNGPGFGYVVAFRPHGATGWMQAAVPSAEASRYVFKNESIQPFSPFLVK
VGVYNNEGEGPFGPVTTINSAEEEPGRAPTRARAKSLSASEVEVSWKALPWNASKKRVLG
YELRYWNKSEREDTASVQRTVGNQTSTVIRGVKGSTAYYISVRAYNTAGTGPPSSTVNVT
TKKPPPSQPPVKLMWNTLNSKIILNWEQVKALENESEVTGYKVLYKKSRHSRPNVMETNT
TSVELALPTDEDYIIQIQPFGEGGEGSSSKQFTIPRIPGPNAVGSASKVSTLSALSTIAL
SFTARTSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagagagc
ggtgtcgtgcagagccccgtcttcagcaagcagcccggcagcatcgtgtatcccgtggag
accggggagaagagccgggaggtggtgttcagctgtgaagcccagggaagcccgccaccc
atctaccggtggaaactgaatggcacagagatcagtcccagatctggaactcattacagc
ttgtccggaggcaacctcagaatcagccatctgaacaaagaccaagatgctggaacgtac
cagtgcctcgcctccaacgctttcgggaccatcgtcagccgagaggccaggctcaccttt
gcatacatggaaaacttcaagattcacagaagaagctccgtctccgtccgcgaaggtcaa
ggagtggttctgctgtgcggcccgccatcgcattctggagatctcgtgttttcctggatc
tttaacgagtacccgacgtttgtgaagcaggacactcgccgattcatctcgcaggagacg
gggaacctgtacatcgccaaggtgaagccctcagatgtcggcaactacacgtgtgtggtg
actaacaccgtcacaaagacccgggtccagggtccgcccactccactggtgctccgcagt
gacggtgtgatgggtgaatacgagccaaagattgaagttcagtttccagaggtcgttcat
gttgccaaaggatccactgtgaagctggaatgcttcgctttgggaaacccggtgccgtct
ataaaatggaagcgagtggacggtgtgcctttccccaggaaagtggacatgaggaaagca
agcggcatcctggaaatcccgtacttccagcaggaggacgccggcacgtacgagtgtgtg
gcggagaactccaggggattgaacacggtgaaaggaaagctctccttctacgcccctcct
catctcatcgagaaaccccaagacgcccagaagctcatcgatgactcgttggtgtgggag
tgcaaagccacggggaagccaaagccttcttacaggtggatgaaaaatggagaaaacctg
gaacctgcagaggagcgcatacaggtggccaacggagggttgtcaataagtcgcctgacc
ctgtccgacacgggaatgtaccagtgtgtggctgggaacaagcacggagaggtctactcc
aacgcagagctccgggtgatagccattgccccagatttctctcacaaccaactgaggagc
cagacgctggtgaaggttggaggagatgtgctcatcgagtgcaagcccaagatgtctccg
tggggcgtgatctcctggcggaagggcagcgagatgctccgagagagtaacagggtcttc
atcttggacaacggtaacctccgggtatggaacgcaaccaagtctgacgtcggcctctac
acctgtgtggcaagaaaccagtttggcgtggccagtagcacaggaagcgtcaccgttaaa
gagccgaccgccatcaccaccctgccgtccacgctggacatcaccgtgggggagagcgtg
gtgctgccctgccaagtgagccacgacccgtcgctggagctcaagttcacgtggttcttc
aacgagcagctcatccacttcgggagccacggaggatattttgaaaaagtgggaggccat
tcggcaggagacattatgattcgaaacatccagctgaggcatgctgggaagtacacgtgc
gccgtgcagacgaaggtggacagcatttccatcgcggccgacttggtggtcagaggtccc
ccggggccccccaccagcctccatgtagaagaaatcactgataccacagcccctctgtcc
tggaggcccggtcccgataatcacagtccaattacggcatacaccatccaggccaggaca
ccattttccctcgggtggcaggctgtcaccacagttcctgagatggtggggggccaccgc
ctgacagctacagtaatagacctgagcccttgggtggagtacgagttccgagtcctggca
ggcaacaccatcgggaccggagagcccagcaagccgtccaaacaagcaaggacgaagggg
acctctccgaaggtcacgccggctaatgtgagcggcggcggcggcagtcgctccgaatta
gtcatcacatgggagccggttccagaggagcagcagaacggaccggggttcggctacgtg
gtggcctttcggccccacggggccacgggttggatgcaggccgccgttccgtccgccgag
gcgtccagatacgtgttcaaaaacgagagcatccagcccttctcgcctttcctcgtgaag
gtcggggtgtacaacaacgagggggaggggccgtttggacccgtcaccaccatcaactcg
gctgaggaagaaccgggccgagctcccaccagggcccgcgccaagagcctctctgcatcc
gaggtggaagtgtcgtggaaagctttgccctggaacgccagtaaaaagagagtcctgggc
tacgagctgcggtactggaataaaagtgaaagggaagacacggccagcgtgcaaaggact
gtgggaaatcagacgtcgaccgttatccgcggcgtgaaaggcagcaccgcgtattacatc
tccgtcagggcgtacaacacggccggaacggggccccccagctccacggtcaacgtcacc
accaagaaaccgccgcccagtcagccaccagtgaaactgatgtggaacacattaaattcc
aagatcatattgaactgggagcaggtcaaggcccttgagaacgagtcagaggtcacggga
tacaaagtgctgtacaagaagagtcgacacagccgacccaacgtcatggaaaccaacacg
acctctgtggagctcgccctgcccaccgatgaggactacatcatccagatacagcccttc
ggagagggaggggaaggcagcagtagcaagcagttcaccatcccgaggataccaggcccc
aacgcggtcggctcagcgtccaaggtctccactctgtcagccctcagtacaatagcgctg
tcgttcacagcccggacatctttatga
DBGET
integrated database retrieval system
