Pseudoliparis swirei (Mariana hadal snailfish): 130208475
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Entry
130208475 CDS
T09868
Name
(RefSeq) inter-alpha-trypsin inhibitor heavy chain H3-like
KO
K24513
inter-alpha-trypsin inhibitor heavy chain H3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130208475
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
130208475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ITI_HC_C
VIT
VWA
VWA_3
VWA_2
DUF2786
DUF3859
VWA_4
vWA-TerF-like
DUF7837
DUF7336
Motif
Other DBs
NCBI-GeneID:
130208475
NCBI-ProteinID:
XP_056293603
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All DBs
Position
18:complement(26690229..26699417)
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AA seq
925 aa
AA seq
DB search
MSGLQGVGLLLLWGCACLWLPGSAHEAMVVSGGNDALEERRGEARHLHKRSTNVAEVEVY
SVKVECTVTSRFAHTVTTSKALNKAKTPQEIFFEVDLPKTAFIVNFSMEINGEVYVGVVK
EKEKAKKQYEKAVSSGQTAGLVKASGRKMETFSVSVNIAAESNVTFILTYEELLQRKLGQ
YEILTRVKPNHPVQEFQIVTHIYEPQGLAFVDAHATFLSNELLPLVDKVVTENKARISFS
PTMDEQRKCPNCEGTLIDGDFIIKYDVKRTKNLGDVQIVNGYFVHFFAPSDLQRVPKNVA
FVIDRSGSMSGSKMEQTHEAMLAILKDLHEDDHFALIQFDDSIDCWRESFSNASKENVAE
GMAYIKTIRPQGVTDINSGVLRGVKMLIKDRQDKKLPERSVDMIILLTDGMPNSGVTSIP
AIQENVKSAIGGQMSLFSLGFGNDVDYSFLDVMSQQNKGVARRIFQGSDAALQLQGFYDE
VASPLLSEVDLRYPGNVVDSLTTHHFTQLYNGSEIVVAGRMTDSYMNNFMVEVFGQGSET
DFLVQGQASALDLDVMYPNEEYIFGDFTERLWAYLTIQQLMEKSKSGTPEEKANATAKAL
EMSLRYSFVTPLTSMVVTKPDIEDGPDSTLIADKLTEAQRQEAEKMGYHQTSPSHYFRTN
YLAHSPTYLVDGDPHFMIELPNREDALCFNLDDKPGTIFNLVRDPDQGILVNGEILGDKK
VSPNGKLNTYFCRFGIEHRALGLKLDVSTHDISVTQDGKRVTYLWSDTASVKGPKMHLLL
TKDRSLTVTLRHSVKFVILLHKVWSGHPFHRDYLGFYTLDSHLMSPSVHGLLGQFYHGIE
YEVSDVRQGEDPEKPDATMHVKGHELNVTRGWQRDFRSDMERGINVPCWFVHSNGTGLID
GDAADYVVSGLFNENSLKNSPKKFT
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtctggactgcagggtgttggactgctgctgctgtggggctgcgcctgcctctggctg
cccggctcggcccatgaggccatggtcgtctccgggggcaacgacgctctggaggagaga
agaggagaggccagacacctgcataaaagaagtacaaatgtggccgaggtggaggtgtac
agcgtgaaggtggagtgcacggtgacgtctcggttcgcccacaccgtcacgacctccaag
gctctgaacaaggccaagaccccacaggagatcttcttcgaagtggacctgcccaagacg
gccttcatcgtcaacttcagcatggaaattaatggcgaggtgtatgtcggggtggtgaag
gagaaagagaaagccaagaagcagtacgagaaggctgtttcctccggtcagactgcggga
ctggtcaaggcctctggaaggaagatggagacgttttcagtgtcggtcaacatcgcagcc
gaaagcaacgtgactttcatcctgacctacgaggagctccttcagaggaaactgggccag
tatgagatcctgactcgagtcaaacccaatcacccggtgcaggagtttcagattgtgaca
cacatctatgagcctcagggccttgcttttgtggatgcccatgcaaccttcctttccaac
gagctgctccccctggtggacaaagttgtcacagaaaacaaggcacgcatctctttctcg
ccgaccatggatgagcagaggaagtgtccaaattgtgagggaacgctcatcgacggagat
ttcatcatcaagtacgacgtgaagcgaacgaagaacctcggggacgttcagatcgtgaac
ggctactttgtgcacttcttcgctcccagcgacctgcaaagagtcccgaagaacgtggcg
ttcgtgatcgacaggagcggatcgatgtcgggatcgaagatggagcagacacacgaggca
atgctggccatcctcaaagacctgcacgaagacgaccactttgccctcatccagtttgat
gattccatcgactgttggagggagtcattctccaacgcgagcaaggaaaacgtggccgaa
ggcatggcctacatcaagaccatacgtccacaaggagtcaccgatattaacagtggagtg
ttgagaggcgtgaaaatgctgatcaaagacaggcaggacaagaagctcccggagagaagc
gtggatatgattattttactgactgatgggatgccaaatagcggagtgacttccatcccg
gccatccaagagaacgttaaatctgccatcggaggccaaatgtctctgttctcccttgga
tttggaaatgatgtggattactccttcctggatgtgatgagccaacagaacaagggagtg
gcccgcagaatcttccagggttcagatgcagcccttcaacttcagggtttctatgacgag
gtggccagtcctctactttcggaggtggatctgcgttacccaggcaacgtggtggactcc
ctgaccacccaccacttcacccagctgtataacggctcagagatcgtggtggccggccgg
atgacggacagctacatgaacaacttcatggtggaggtgttcggccaagggtctgagacg
gacttcctggtgcagggccaggccagtgctctggacttggatgtgatgtatccaaatgag
gagtacatctttggggatttcacagagcgtctgtgggcgtatctcaccatccagcaacta
atggagaagagcaagagtggaaccccagaagagaaagccaacgccaccgccaaggccttg
gagatgtctctgcgctacagcttcgtcacccctctcacctccatggtggtcaccaagccc
gacatcgaggacggaccggacagcactctgatcgctgataagctgaccgaggcccaaaga
caagaggcagaaaaaatgggatatcaccaaacaagcccttcacattattttcggacgaat
tatctagcacactcacccacatatttagtggacggagatcctcatttcatgatcgagctc
cctaacagagaggacgccctgtgtttcaacctcgacgacaaacccggaaccatcttcaac
ctggtcagagacccagatcaaggtattttggtcaacggggaaatcctcggagacaagaag
gtgtctcccaacggtaaacttaacacctacttctgccgcttcggcatcgaacaccgggcc
ctggggttgaagctggatgtgagcactcacgacatctcagtgactcaggacggcaagcgg
gtcacgtacctctggtccgatacggcctccgtcaaaggacccaaaatgcaccttctcttg
actaaggatcgcagcctcacggtgactctcaggcattccgtcaagttcgtcatcctgctg
cacaaagtgtggtcggggcacccgttccaccgggactacctgggcttctacaccctggac
agccacctcatgtccccctctgttcacggcctgctgggtcagttctaccacgggattgaa
tacgaggtgtcagatgtgcgtcaaggggaagaccccgagaaaccggacgccaccatgcat
gtgaaaggacatgagctcaatgtgaccagaggctggcagagagacttcaggagtgacatg
gagagggggataaacgttccctgctggttcgttcacagcaacggaaccggcctcatcgac
ggagacgcggccgactacgttgtttcaggcctatttaatgaaaacagtttaaaaaacagc
ccaaaaaagttcacctaa
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