Pseudoliparis swirei (Mariana hadal snailfish): 130208485
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Entry
130208485 CDS
T09868
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130208485 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130208485 (fancd2)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
130208485 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
TAFH
CCDC53
GRIN_C
Motif
Other DBs
NCBI-GeneID:
130208485
NCBI-ProteinID:
XP_056293626
LinkDB
All DBs
Position
18:complement(15813468..15832100)
Genome browser
AA seq
1442 aa
AA seq
DB search
MMRKKRRSSVDKGEEATTTTKAKKSRNTGRKLKEPAPEETNESVFGVFLREAGVTLKHAG
TSNEIAVDQVVFQKRLQKQLQKSPRYPGIVKEFTTGLESHIEDPERFRNCLLPCVPRLLD
GDSSQVSSFQESLLRMLLGIEMLQSFIINTLLEKLPEFMFDGTGDGGLSIPHAIINQFKW
LDRIVDSKELAAKLMELVSVAPVEVQRDIITSLPEILEDSQHNDIARELNSLLQENTQLT
VPILDALSSLNLSSSLLTEVRGAVMVTLAAVQLEDLPVVVKFVLHSVSASDAYEVVRNLR
KKLELEQCVLPPVLQASQSRIKSKGSAASSSTPSAGSSQDSVTLILDGIKSAVRFQKMIS
EAWLKAIESVDEEEDHKVVDLLVLFILHSTNANQSRRGAERLLKGKVRTGLIQEPLLQRT
FRDYAQVMRGYFPSILSLAQSLLRSPDPCVVPFGGHMYRHSFTAFDSYCQQEVVGSLVTH
VCSGVGGEVDMALELLCGLVTEKPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSGLA
FGQQQQGSHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVRIVGSMGAVRLKVKESQNGSLP
QETLRQVTALLELVKSSSESSPEAAALYYDELANLMLSSTLDPQVQQSIEKSVIDDFQVD
FVVDVGPKISGSFPFTPCVLYDLEGQGNSIAINLLPLLAQNVQMKGEQQNQTSKTHKRVS
PLCLSPLFRLLRLCEHKQHQGDLEEIDGLLGCPLILTDMDVVEKMESLSKAEREFLCTLL
FHTINWFREVINAFCEQKETEMKMKVMTRLQNITYLQTLLERALAETPGYVPPVANFDGE
STEGVILSSAAPVIKAKKDAPGKKRKAPGKNSSESSAQLEEMTEADKTQQEQPEKEKEKE
IRQGVSLLSYRQFFRELDMEVLDVLQCGLLSRSLLDSELHTKVREEVLLGPAELVFLLED
MHRKVEFSLTAAPAKRVPFFKARADKSVGFSHLQQRSSKDVASYCVQLLPALCSHLENCH
NHFQTLLSDNNGVVDGPATDIQQHHLMSSSYQLLLQVLNTTFSWSGFSQPGQRGLLKKAL
GVLAERLKEESAELTLEQLVKHSFEYLVNFRSTMPSLSTALCLSQLLSTVSEKGGNSASY
REQTASLAKRFLSQDWVTASGQKERGNKFNEALHTLLRIYLEHVDDVLKAVEEITERGIA
ELLNASKDESSASWPTLNRQTFLVFYKVLMAELEKAIRKIPVGKVSDNVEAQSEKLLTWK
LAVEDFHALVKIVMVFDSRPVLIVCLKYGRLFLDSFLKLGMPLLDNSFKRHTEDVQSLLK
VFQLSTRQLHHMCGHSKIHQDTSLTNHVPALKKSLELFVYRVKAMLTLNNCQEAFWIGNL
KNRNLKGEEILSQRSQGSDEDEDEEEQCSPLPQDQSEDEDMESTTVNREDDVDQDDVIED
SD
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaaaaagcgacgctcgtctgtggataaaggagaggaagcaacgacgaccact
aaggcaaagaagagtcgcaacactggtcgcaaactaaaggaaccggctccagaagaaaca
aatgaaagtgtatttggtgtctttcttcgagaagcaggtgtcaccttgaaacacgctgga
acatccaatgagattgctgtcgaccaagtagttttccaaaagaggctacagaagcaactc
cagaagagtcccaggtaccctgggattgtgaaggagtttaccactggactagagtctcat
attgaggaccctgagcggtttaggaactgccttcttccatgtgtcccacgattgttggat
ggagactccagtcaggtcagctcttttcaggaaagcctgctgcgcatgctgttgggcatt
gagatgctgcagagctttatcattaacaccttgctcgagaagctccctgagtttatgttt
gatggcaccggagatggaggactcagtattcctcacgcaattatcaaccagtttaaatgg
ctagaccgaattgtggacagcaaggagttggcagcgaagctcatggagctggtgtcagtc
gcaccggtggaggttcagcgtgacatcatcactagtctgccagagatactggaagactcc
cagcacaatgatatagccagagagctcaactctttactccaggagaacactcagttgact
gtccccatcctggatgccctctctagtctgaaccttagttcctcattacttactgaggtc
cgtggcgccgttatggtcaccttggctgctgtgcaactggaggacttacctgtggtggtc
aagttcgtcctgcattctgtctcagcctctgatgcctatgaggtggtgcgtaatcttcgt
aaaaagttagagttggagcagtgtgttctccctcctgtgctgcaggcctctcagagccgc
ataaagagcaaaggatcagcagcgtcctcttccacaccatcagctggcagcagccaagat
agcgttacattgatactggacggcatcaagtcagcagtgcgattccagaaaatgatatct
gaggcgtggctcaaggcaattgagtctgtggacgaagaggaggaccataaggtagtagat
ctgctggtgctgttcatcctccactccaccaacgctaaccagagccgacggggcgcggag
cggctgctgaaggggaaagtgaggactggactgatccaggagcctcttctccagaggacc
ttcagggactatgctcaggtcatgcgagggtatttcccctccatcctgtctctggctcag
agtttgttgcgctcccccgacccatgtgtggtgccttttggtggacacatgtaccgacac
tcattcacggcttttgactcttactgccaacaggaggtggtgggctctttggtgacccat
gtgtgcagtggtgtgggtggggaggtggacatggctctggagctgctctgcggccttgtc
acagaaaaaccctcagaaatggccctttatgctgtttttgtcaagggaatcttagattac
atggacaacctcacaccccagcagatccgcagactcttccaccttctgagcggcctggcc
ttcgggcaacagcagcagggatctcacatccaggatgacatgcacatcgtgatccgcaaa
cagctctccagcactgtgcccaagtacaagcgtattggcatcattggcgccgtcaggatt
gtaggaagcatgggcgccgtcaggcttaaagtgaaagagtcacagaatggctcgttaccc
caggagacactcagacaggtgaccgccctgttggagctggtgaagtccagcagtgaaagc
tcacctgaggctgccgctctctactatgatgaactggccaacctgatgctgagctctacc
ctggacccacaggtgcagcaaagcatcgaaaagagtgtcatagatgacttccaggttgac
tttgtggtggacgtcggaccaaaaatatcaggttcctttccctttacgccctgtgtgttg
tatgacctggaaggtcaaggaaacagcattgccatcaacttactgcctctactggcccaa
aatgtccagatgaaaggagagcaacagaatcaaacctcaaagacccacaagcgcgtgtct
cctctctgtctgtctccattattccgcctcctgagactctgtgagcacaaacagcaccag
ggagacctggaggagattgacggcctgctgggctgccctctgatcctgacggacatggat
gtagtagagaaaatggagagcctgtctaaagctgagagggaattcctctgtacgttgctg
tttcacaccatcaactggttcagagaggtcataaatgcattctgtgaacaaaaagaaact
gagatgaagatgaaagtgatgacccgtctgcagaacatcacctaccttcagacactgctg
gagagggctttggcagaaacacctggctatgttccaccggttgccaactttgatggagaa
agcacagagggtgttatacttagttctgctgctcctgtgattaaggcaaagaaagatgca
ccaggaaagaaaaggaaggctcctggtaagaattcctcagagagcagcgctcagcttgag
gagatgactgaagcagacaaaactcagcaggagcagccagaaaaggagaaggaaaaggag
atccggcaaggtgtcagcctgctgtcctacagacagtttttcagggagctggacatggag
gtgcttgatgtgctgcagtgtggcctgctgtcccgctcactgctcgactctgagctccac
accaaggtgcgggaggaggttctgctgggtcctgctgagctggtgttcctgctggaggat
atgcatcgcaaagtggagttcagtcttaccgctgcccctgcaaagagagttcctttcttt
aaggccagggccgataagagcgtgggcttctcccatctacagcagaggagctccaaggat
gtcgcctcctactgtgtccagctgctgcctgccctctgctcccacctggagaactgccac
aaccacttccagacactgctgtctgataacaacggtgttgttgacggacctgccacagac
attcagcagcaccatctgatgtcatcaagctaccagctgctcctgcaggtcctgaacacc
accttcagctggtctggattcagccagccaggacagcggggcttactgaagaaggcgctg
ggagttttggctgaacgactaaaagaggaaagtgctgagttgaccttggagcagcttgta
aaacacagcttcgagtacctggtgaacttccgcagcacaatgccaagtctcagcacagct
ctgtgtctctcccagctgctgtccactgtgtcagagaaaggaggcaactccgcttcctac
agagagcagactgcttcccttgcaaaaagattcctcagccaagactgggtgacagccagc
ggacagaaggagcgcgggaataaattcaatgaagcgcttcacactctcctaagaatttac
ctggagcatgtcgatgatgttctgaaggcagtggaggaaataactgaaagaggaattgca
gagctcctgaatgcatcaaaagatgagagctcggcgtcatggcccactctcaacaggcaa
acattcctggtgttctacaaagtgttgatggcagagctggaaaaggccatcaggaagatt
cctgttggcaaagtcagtgacaacgttgaggctcagagtgagaagctgctgacatggaaa
ctagctgtcgaagattttcatgccctggtcaaaatagtgatggtgtttgattctcggccc
gtgctcattgtgtgtctgaagtatggccgccttttcctggattctttcctgaagttgggg
atgccactattggacaacagtttcaaaaggcacacggaggatgtccagagcctgctgaaa
gtcttccagctcagcacccggcagctccatcacatgtgtggacattctaagattcaccag
gatacaagcctgaccaatcacgtaccagccttaaagaagagcctcgagctgtttgtttac
cgagtgaaggccatgctgacgctcaacaactgtcaagaggcattttggattggcaacctg
aagaatcgcaacctgaagggtgaagagattctttctcagcggtcacaaggaagtgatgaa
gatgaggatgaggaagagcaatgttccccgctgcctcaggaccagtcagaggacgaggat
atggaaagtacgacggtcaacagagaggacgatgtggatcaagatgatgttatagaggac
tctgactaa
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integrated database retrieval system
