Pseudoliparis swirei (Mariana hadal snailfish): 130208566
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Entry
130208566 CDS
T09868
Symbol
arhgef3
Name
(RefSeq) rho guanine nucleotide exchange factor 3 isoform X1
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130208566 (arhgef3)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130208566 (arhgef3)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
Aip3p_Bud6_N
Motif
Other DBs
NCBI-GeneID:
130208566
NCBI-ProteinID:
XP_056293736
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Position
18:3280947..3305164
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AA seq
641 aa
AA seq
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MVVGLRPLCLLVHRFKSGCSVELVKGDGDNDMGKRVEVFPFPACFADTLTDTSHADVVLE
PGTKRSKLVSRVTSLAALLPPVKKRIGQTLQCSISVRNESQTERAAPHLPPPFSSSSSTT
KRRVISATVSNPSSSMTATRVSTATVPAAKRRDSKLWSETFDVRLGATQPLSPKEIKRQE
AIFELAQGEQDLVEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLIPLHEDLLSRLR
DARKPDGSTEHVGRILTDWLPGLSSYTSYCSNQVKAKALLDQKKQDRRVQDFLQRCLQSP
FSRKLDLWNFLDIPRSRLVKYPLLLREILKHTASDHPDWQHLDQAMLMVQSVVADINRRT
GESECEYYKDRLLYAEDGQRDELIARSRTLSCHGELKNHRGLKLQVFLFQDVLVITRSAS
PSDQPIGYLLCRQPIPIRRLDLEDLSDGEMRVGGSIRGAFSNNERTKNFFRVSDRTGGPL
QSHSFQASDAFNKQQWINCIRQAKEAAALTGDQPPEAGLRGPGLTGPGLGGPGLGGPGLT
GPLGETETGPGSKDLCLGEEAEERLTGREMETGQDGEMCAEPGERGGGGGGGGGGGGGGG
GGGGGTLSGGASDAPALRLPCREEQEGEMIMDTGEVDSLRC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgggtctgaggcccctctgcttgctggtccaccggtttaagtccggatgctcc
gtggagctcgtcaagggggacggagacaacgacatgggcaaacgggtggaggtttttcca
tttcccgcctgctttgctgatacgctgaccgacaccagccatgctgacgtagttctggag
cccggcaccaagcgcagtaagctggtctccagggtgacgtctctggccgccctgctgccg
cccgtgaagaagaggatcgggcagacgctgcagtgctccatcagtgtccgtaatgagagt
cagacggagagagccgctcctcatcttcctcctcccttctcctcctcctcctctacaacg
aagaggcgcgttatctcggcgacagtctccaacccgtcctcatccatgactgcgacccgg
gtttctacggcaacggtcccggccgccaagcggcgcgacagcaagctgtggagcgagacg
ttcgacgtccggctgggagcgacgcagccgctgagccccaaggagataaaacgacaagag
gctatatttgagttggctcagggcgagcaggacttggtggaggatctcaagttggctaag
aaggcctaccatgacccgatgctgaagctgtcaatcatgaccgagcaggaactgaaccag
atcttcggcactctggactcgctgatcccgctgcatgaagacctgctgagtcgcctccga
gacgccaggaaacccgacgggtccacggagcacgtgggccgcatcctgacggactggctt
cccggtctctcctcctacacctcgtactgcagcaaccaggtgaaggccaaggcgctgctg
gaccagaagaagcaggaccggcgggtccaggacttcctgcagcgctgcctccagtcgccc
ttcagcaggaagctggacctgtggaacttcctggacatcccccgcagccgactggtgaag
tacccgctgctgctgagggagatcctgaagcacacggccagcgaccacccggactggcag
cacctggaccaggcgatgcttatggtccagagcgtggtggcggacatcaaccggcggacc
ggggagtcggagtgcgagtactacaaggaccgcctgctgtacgcggaggacgggcagcgg
gacgagctcatcgcccggtccagaaccctgagctgccacggggagctgaagaaccaccgg
ggcctcaagctccaagtcttcctcttccaggacgtgctcgtcatcaccaggtcggcctcg
ccgagcgaccagccaatcggctacctgctctgccgccagccgatccccatccggcggctg
gacctggaggacctatcggacggggagatgagagtgggcgggtccatcagaggggcgttc
agcaacaatgagcgcacgaagaactttttccgtgtttcggaccggaccggcggtccgctg
cagagccacagcttccaggcgagcgacgccttcaacaagcagcagtggatcaactgcatc
cgacaagccaaagaggccgcggcgctgaccggagaccagccgccggaggccgggctgcgg
ggacccgggctgacgggacccgggctggggggacccgggctggggggacccgggctgacg
gggccgctcggggagacggagacggggccgggttcaaaagatctctgcttgggtgaagag
gccgaggagagattgacaggcagggagatggagacgggtcaggatggggagatgtgtgca
gagccaggagaaagaggaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggagggactctgagcggaggtgccagtgacgctcccgccctccgcctcccc
tgtcgagaggagcaggagggggagatgatcatggacaccggcgaggtggactccctgcgg
tgctga
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