Pseudoliparis swirei (Mariana hadal snailfish): 130208571
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Entry
130208571 CDS
T09868
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130208571 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130208571 (u2af1)
Spliceosome [BR:
pswi03041
]
Complex A
U2 snRNP components
U2 related factors
130208571 (u2af1)
Complex B
130208571 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130208571
NCBI-ProteinID:
XP_056293753
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Position
2:complement(7164301..7172908)
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AA seq
251 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHKSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGGGGGGGGRDHDKR
RSRDRERSGRF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacctggcgtccatttttgggacagagaaagataaggttaactgctccttt
tatttcaaaattggtgcctgtcgacatggagaccgctgctccagattacacaataagccg
acattcagtcagactattgccctcctgaacatttaccggaaccctcagaacagcgcccag
tctgctgatggcctcacctgtgccatcagtgacatggagatgcaggagcactatgacgag
ttttttgaggaggtcttcactgagatggaagaaaagtacggagaggtggaggagatgaat
gtatgtgacaacctcggggaccacctagtaggaaatgtgtatgtgaagttccgttatgaa
gaggacgctgagaaggctgtgatagacctgaacaatcggtggtttaatggccagcccatc
catgctgagctctctcccgtcacagacttcagagaagcctgctgtcgccaatatgaaatg
ggggaatgcactcgaggtggcttctgtaacttcatgcacctgaagcccatctcgcgtgaa
ctgaggagagagctctacggccgccggaggaagggccgccataagtcgcggtctagatcg
agagagaggcgctctcgctcgagagacaggggtcggggcggaggaggaggaggaggagga
ggaggaggaggaggaggaggcggaggtggtggtggaggtggccgtgaccacgataaacgt
cgctccagagacagagagcgttcagggcgattctga
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