Pseudoliparis swirei (Mariana hadal snailfish): 130208584
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Entry
130208584 CDS
T09868
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130208584 (ift52)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130208584 (ift52)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
Motif
Other DBs
NCBI-GeneID:
130208584
NCBI-ProteinID:
XP_056293775
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Position
18:23394428..23398399
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AA seq
432 aa
AA seq
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MEKEALNVVVFNVSKKELFTTNNGYKSVQKRLRAQWKIQSMKEELSLEKLKGVKLWITAG
PREKFTASELEVLKLYLDGGGNVLVMLGEGGEMKYNTNINFLLEEFGVVVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGVIEEENVGNNAQALTFVYPYGATLSVMKPA
VAILSTGSVCFPLNRPVLAFHEGKEGGKLVVLGSCHMFSDQYIDKEENSKILDVVLQWLM
ADNIQLNQIDAEDPDITDYTMLPDIGCLAEQLRVCLQVGDENPRDFTSLFDMSLFNLSTD
ALPQVISAYKQLHVKDEPLQLIAPHFETPLPQLQPAVFPPALSELPPPMLDLFDLDEAFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEPDTEEPFTPL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagcgctgaacgtggtcgtcttcaacgtgtcgaagaaagagctgttcacc
acgaacaatggctacaaatctgtccagaaaagactgagagctcaatggaaaatccaaagt
atgaaggaagagctgtctctggagaagctgaagggtgtcaaattgtggataaccgcagga
ccgcgggagaagttcacagcttcagagctggaggtgctgaagctgtacctggatggggga
ggaaacgtcctggtcatgctcggtgaagggggagaaatgaagtacaacaccaacatcaac
ttcctcctggaggagtttggcgtggtggtcaacaatgacgctgttgtgaggaatgtgtat
tacaaatacttccatccgaaagaggcgctggtgtccaacggtgtgttgaacagagagatt
agtcgggctgctggcaaagtggtcacaggcgtcatcgaagaggaaaatgttggaaacaat
gcacaggctctcacgtttgtgtacccgtacggagccacactgagcgtgatgaagccggct
gtggccattctttcaactggctccgtctgcttccccctcaacaggccggtcctggcattc
cacgaaggaaaggagggtggcaaactggtcgtgttgggctcctgccacatgttcagtgac
caatacatagacaaagaggagaacagtaaaatcctggatgttgtgctccagtggctcatg
gctgataatatccagctgaatcagattgacgcagaagaccccgacatcacagattacacc
atgctgccagacatagggtgcttggcggaacagctcagagtgtgcttacaagtgggcgac
gaaaaccccagggacttcacctcgctgtttgacatgtccttgttcaatttgtcaaccgac
gccttaccccaagtcatcagtgcctacaagcagcttcatgtcaaagacgagccacttcag
ctgatagcgccacattttgagacgccgctgcctcagctccaacccgctgtctttccacct
gccttgagcgagttgcctcctcccatgctggacctgttcgacctagatgaagcattctcc
tcggagaaagtgcgcctggcacagctcaccaataaatgtacggacgatgatcttgaattc
tacgtgaggaaatgtggggagatcttgggggtgactccaaagttggataaagagcagagg
gatgccaagcacatcttggaacacattttcttccaggttgtagagttcaagaaactcaat
caggagcccgacactgaggaaccgttcacgccattgtga
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