Pseudoliparis swirei (Mariana hadal snailfish): 130208587
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Entry
130208587 CDS
T09868
Name
(RefSeq) PHD finger protein 20-like isoform X1
KO
K18402
PHD finger protein 20
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130208587
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130208587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
Tudor_2
PHD
Agenet
MBT
DUF4537
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
130208587
NCBI-ProteinID:
XP_056293779
LinkDB
All DBs
Position
18:complement(25753022..25766272)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSKTPPNRRGISFEVGAQLEARDSLKNWYAANIEKIDYESEKVLVHYRQWSHRYDEWFDW
TSTYLRPVERVQLRRQGLHDDAPDPGFNVNDKVLASWSDCRFYPATVLSVNKDASYTVKF
YDGVIQSVKGIHVKPFTKESGGEKSQSSDSNMVRRAPNRRDRRPQENGGPKSKRARRSTS
DREEDSNSEAEERVEGMMKNKKTNFEAAPTIKQEEDTSEISDPNKPADAEKGTGLTNGVK
AEEEGGGGGERNEERCRVNGEVKKEEAETETEQSGTKPYAAEAAAPKPYPELPTQTPAQI
EQVPVAMTTAASNGDAEPKPNVQSESAAPVADVPPPQPVKPVRKQGFHNPNRFSREPLYR
VIKNQPPPVLSINLDHNPFKCSAPGCTKSFRKAKLLHYHMKYYHGEEQPAEGERSPTRSV
QTRASEKQTAPAGLDGPKRRRTISASMHSGPAAAPRGEVKAAAGRRTSAPPAVNSQGHQQ
RALLREKSKENQLDRNGCHQPDSDRSGFDVGSVKDKLREKPKQKDFLRIKLKKKKKKKKA
KSDYTGSEENIDISVLGLPSKLKLPLKFPPSHNHKPEAYPGRPGFSYSQQIHVDDEDSLS
DWSTDSCGWSDDDFGVDLDVAMPPLSVDSGAVDTSDQEIVRCICEVEEENDFMIQCEACL
CWQHGTCMGLLEDNVPDRYTCHICRDPPGQRQSLRYWYDREWLSSGHMYGLSFLDENYSH
QNAKKITTTHQLLGDVHHVVEILNGLKLKMSILQSNTHSDLQLWRQPWKHQERSRTALNS
CRGSDAAPSPATPDEDMSRGEILMSNALEKLSRAATAATSSSSSSSFPFPSFQDSYIVSE
HCYQKPRAYYPAVEQRLVVETRQGSELEDSMRSTEELLEREQRYGSLLETDRPKATGTNY
KASMGCSWSQAETREERERDPREAADHSRQHQQRQINLLDHIDSVQDEVSHRMDFIEREL
DVLESWLDYTGELEPPEPLARLPQLKQRMKRLLMQLGKVQQIALYSST
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgccccctaacagaagagggatatcttttgaggtgggagctcagcttgag
gccagagacagcctcaaaaactggtatgctgccaacatagagaagatcgactacgaaagc
gaaaaagtactcgtccattaccgccagtggagccaccgctacgacgagtggtttgactgg
accagcacctacctgaggcccgtggagagggttcagctgcggcggcagggcctgcacgac
gacgctcccgaccctggctttaacgtgaacgacaaggtcctggcgagctggtccgactgc
cgtttctaccccgctacggtcctttcggtcaacaaagatgcatcctacactgtgaagttc
tacgatggtgtaatccagtcagtgaaggggatccacgtgaagccgtttactaaagagagt
ggtggagagaagtctcagtcctccgacagcaacatggttcgaagggccccgaaccgcagg
gacaggaggccccaggagaacgggggtcccaagagcaagcgagcccggcgcagcacatcc
gaccgggaggaggacagcaacagcgaggcggaagagcgggtggaggggatgatgaagaac
aagaagacaaactttgaggccgcgcctaccatcaagcaggaagaggacacgtcggagatc
tcggaccccaacaagcccgccgatgcagaaaagggaacgggacttacaaacggcgtgaag
gcggaagaagaaggcggcggcggcggcgagcgaaacgaggagcggtgtcgggtaaacgga
gaggtgaagaaagaggaggcggaaacggaaacggagcagagtggaacaaagccatacgcg
gcggaggcggccgcgcccaagccataccccgagttgccaactcagacgcccgcacagata
gagcaggtgcccgtcgccatgacgaccgcggcatccaacggcgacgcagagccgaagccg
aatgtccaatcggagagcgctgcgcccgtggcggacgtgccgcctccccagcccgtgaaa
ccggtgcggaaacaaggtttccacaaccccaacagattcagcagagagccactgtaccga
gtcatcaaaaaccaacctccccccgtcttgtccatcaacctcgaccacaacccgtttaag
tgcagcgcccccggctgcacgaagtcattccgaaaggccaagctgctgcactaccatatg
aaatactaccatggcgaggagcagcctgcggagggggagcgcagccccacccggagtgtc
cagaccagggcctctgagaagcagacggcgcccgccggtttggacggcccgaagaggcgg
cgcacgatctcggcctcgatgcactccgggcccgccgcggctccccgtggcgaggtgaag
gctgcagcaggcaggcgtacatccgcaccgcccgcagtcaactcccagggccaccagcag
agggcgctgctgagggagaagagcaaggagaaccagctggacaggaacggatgccatcag
ccggactcggacaggagtggctttgacgtcgggtcggtcaaagacaaactgagagagaaa
cccaaacagaaggacttcctccgcattaaactaaagaagaagaagaagaaaaagaaggcc
aagtccgactacacaggtagtgaggagaatattgacatctcagtattgggtcttccgtcc
aaattgaagttgccactcaaattccccccctcacacaatcacaagcctgaggcctacccc
ggcaggcccggattcagctactcacagcagatacatgtggatgatgaggatagcctcagc
gactggtcgaccgacagctgtgggtggagcgacgatgactttggggtggatctggacgtc
gccatgccgcccctgagcgtggactccggtgccgtggacacgagtgaccaagagattgtg
cgatgtatctgtgaggtggaggaagagaacgacttcatgattcagtgtgaagcttgtctg
tgctggcagcatggcacctgcatgggcctgctggaagacaatgttcccgatcgatacacc
tgccacatctgcagagacccaccaggtcagaggcagagtctgcgctactggtacgaccgc
gagtggctgagcagcggtcacatgtacggcttgtccttcttggacgagaactactcccac
caaaacgccaagaagatcaccaccacccaccagctgctgggagacgtgcaccacgtggtg
gagatcctcaacgggctgaagctcaagatgagcatcctccagagcaacactcactcagac
ttgcagctgtggcggcagccctggaagcatcaggagaggtcgcgcaccgccctcaattcg
tgccgcggcagcgacgccgctccgtctcccgcgactcccgacgaggacatgagccgcggc
gaaatcctgatgtccaacgctctggagaagctgagccgggcggccaccgccgccacctcc
tcgtcctcgtcgtcgtccttccccttcccgtccttccaggactcgtacatcgtcagtgaa
cattgctaccagaagccgcgggcgtattacccggcggtggagcagaggctggtggtggag
acccgacagggctcggagctggaggacagcatgaggagcacggaggagctgctggagcgg
gaacagcgctacggaagcctgctggagacggacaggcccaaagcaacaggcaccaactac
aaggcttcgatgggctgctcctggtcccaagctgagacgagggaggagcgcgagagagac
ccgagagaggctgccgatcacagcaggcagcatcaacagaggcagatcaacctgctggac
cacatcgactcggtccaggacgaggtctcgcaccggatggacttcatagagcgggagctg
gacgtgctggagagctggctggactacaccggggagctggagcccccggagcccctggcc
cgtctgcctcagctcaaacagcgcatgaagcggctgctgatgcagctggggaaggtgcag
cagatcgccctgtacagctccacatga
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