Pseudoliparis swirei (Mariana hadal snailfish): 130208621
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Entry
130208621 CDS
T09868
Symbol
tfe3b
Name
(RefSeq) transcription factor E3b
KO
K09105
transcription factor E3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130208621 (tfe3b)
04137 Mitophagy - animal
130208621 (tfe3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208621 (tfe3b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
130208621 (tfe3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
130208621
NCBI-ProteinID:
XP_056293840
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Position
18:complement(25509987..25518179)
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AA seq
449 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQSSASQLRATDSTPAISVTLPPNAARPPPAQVPV
EVLKVQSHLENPTRYHIQQAQRQQVKQYLSTTLGNNAVTQTMGLSPVPQSSSAPEVAPTA
SSVPNSPMALLNIGSNKEEIDDVIDDIISLESSFNDDIITLIDSGLQLPSTLPGNLLDIY
NNSGMAAPTFTVSNSCPADLSQIKREVPDVDTKSLMKERQKKDNHNLIERRRRFNINDRI
KELGTLIPKTNEPYHNDVSEMRWNKGTILKASVDYIRKLQKEQQRAKDIDMRQNKLELAN
HGLMLRIQELEMQARLHGLSPDLARLQQQQQQLPHGGPSLPPGAEGVSSQNLLGLGAAGL
GQPLPASFLSPPSSDSPVGVTISSPLDLGSLSFAELDDSSASALYPDVGLGDFLMDEGCT
LDRMAEPLFSPLSPGASKSSSSLEMDEDL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgcgtgctgctgcggcagcagctgatgcgagaacaagcccaggagcaggag
agacgcgaggcccagcagcagtcctccgcctctcagctccgggccaccgactccactcca
gccatctccgtcacactgcccccgaatgctgcccgcccgcctccggcacaagtgcctgtg
gaggtgctgaaagtccagagccacttggagaaccccaccaggtaccacatccagcaggca
cagaggcagcaggtgaagcagtacctctccaccaccctgggcaacaatgcggtgactcag
accatgggcttgtcgcctgtgccgcagtccagttctgcccctgaagttgcccccactgcc
agcagtgtccctaacagtccaatggctctgctcaacatcggatccaacaaggaggaaatt
gacgacgtgattgacgacatcattagtcttgaatccagttttaatgacgacatcattacg
ttaattgactcggggcttcagttgccaagcacgctcccgggaaatctgttggatatctac
aataactctggaatggcagcaccgacgttcactgtcagcaactcctgccccgctgatctt
tcacaaattaaaagggaagttccagatgtagacaccaagtcgttaatgaaagaaaggcag
aagaaggacaaccacaaccttattgagaggaggcggagattcaacatcaacgaccgcata
aaggagctcggcactctgatacctaagacgaatgaaccatatcacaatgatgtcagcgag
atgcgctggaataaaggcaccatactgaaggcctccgtggactacatcaggaagttgcag
aaggagcagcagagagccaaggacatcgacatgcgtcagaataaactggagctggccaac
cacggtctcatgttgcgcatccaggaactggaaatgcaggcgcggctccacggcctgagt
cccgatctagctcggctccagcagcagcagcagcagctcccgcacggcggtccgtctctg
ccccccggtgcagagggcgtgtcctcccaaaacctcctcggcctgggcgcggcaggcctc
gggcagcctctgccggcctccttcctgtccccgccctcctcggactctcccgtgggcgtc
accatcagtagccccctggacctgggcagcctgagcttcgccgagctggacgactcctcg
gcgtcggcgctctacccggacgtgggcctgggagactttctcatggacgaggggtgcacc
ctggacaggatggcggagccgctcttttcccccttgtcaccaggtgcctcgaaaagcagc
agcagccttgaaatggacgaggacttgtga
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