Pseudoliparis swirei (Mariana hadal snailfish): 130208658
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Entry
130208658 CDS
T09868
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5-like isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130208658
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
130208658
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_11
FYVE_2
PH_9
PH_20
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
130208658
NCBI-ProteinID:
XP_056293889
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All DBs
Position
18:complement(16402286..16424465)
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AA seq
1455 aa
AA seq
DB search
MNTDCTKPSVAPKPRCVCHTSLKLPSPLMSAARGPKPFIAPKPKVTPELNGNQGGCFNGG
LLNSDDEGDDEHEKENSLNKVVADRLPAEKQFKLYILKSPQHNVHGSKDGEGTEEEKEEE
ADMIHKVDEDWKLIDSALSEEADSLETLWVSDAGLTAESEDAVEMVDTDVTEDIETEGCD
AGEALADTDGLSVGDISVNSIDEEARYCAEHRDMRRRPGNLQINEDETDDCTADDLTESL
TDEPYLISNGNVKDTVTQDGEEKEEETAPGSDITWNILTFQCGHKVKEKGENKQNVSFYD
FKHEDQRHVAVEDGPPHEPYYVSSEDIINREMISRYNHAHRLPQSPLSSGNNSGVPAGKY
QKTAENGQTEFVSSEDYVEVGNPLQYSSYNRDENKARAYLKMTDELKAQTPEAFFDHVDC
QPRFRLVSISVPTDTDTSLTSSLSESQLLSPSDSDVFEEDLEGHIVPFLEHTADTEPDSS
DEHVYEEPGHSLEGNKVFPSHKSTAEMLACSRSHHIHNNVAELGVQFVHRPYMSGIGQPA
LSSSPMVSSTRHKRYSKPQYLSLYPRSLSMEGQDMPLGVYYREGAPRQGGAICSSGSFSR
CSPLASSGRSTPTSVVDIPPPFELAYITKRPITKSSPSLFIEGDSSEKNRKKKSSIKRFL
MLKFRRKTDSKPVDVNPSLFKSSAESYHHTPSRLLDLERRSFSSSPQLISRSASKPHVSS
ETTFLLYKERKGNSVAFLNRSVVRVESFEERSCVPFIPLPLTKPRSISFPNVDTSDYENV
PAISSDYENLQVPQRRPVCQAPFTGFFDRTNRVMSSANDTDGYVDMSSLPGFKNTTQSPE
QETESAYTEAYNMCSVAVSVDDVGGETAGEEDQGRTSDEEDGGLDSIYDRQLDGRSRAFY
IAKELVDTERLHVKALKLLQEDFREAVGAAVGDEGDPVLDEERLREILNELPDVYTLHRR
ILSELENRIRHWEESQRIADIYLSRKAEFLVFTTYIGHYDRSMSLLEDSCRASPAFAAIV
HQFEQQSPAGEKVSLKHQLLQVIVRVAQYRMLLTDYLNNLSPDSKEYKDTQAAVAVVSDI
ADQANDSLKHGENLLRLVNIEYSVRGLWDLLQPGRVFLKEGTLMKVSRKNRQPRHLFLMN
DVLLYTYPQQDGKYRLKNTLPLTGLKVSKPIVENVQNALRIEGTDISITLSASSFLERED
WFYTLSRTVTEHTRGSVVFNSCSGEARDRLRLTLGEKAPTLVPVSEVMMCMNCTSDFSLT
LRRHHCHGCGRIVCWSCSRNRYPLKYMKDRMAKVCDHCYNELKKRGGDVSALSGKSSPRP
NRSNRPLSTVFQNIHPPNIWRHRKGTASFTPVTVSEEGSISGTLQRSKTSKRNWKRLWFL
LRDKVLYTYRAQEEKVASESLPLLGFTVKLPDKREEEEANIFQLYHKNTLYYSFRAEDNY
TAQRWVNAMEEATVL
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagactgcaccaagccttctgttgctccaaagccaagatgtgtttgtcacacc
agcctaaagctgccctcccctctcatgtccgcagccaggggtcccaaaccttttattgcc
ccaaaacctaaagtcacaccagagcttaatggtaaccaaggaggatgcttcaatggcggc
ttactaaattcagacgacgagggtgatgatgagcatgagaaagagaacagtctcaacaaa
gttgttgcagacaggttgccagcagagaaacaatttaaactctacatcctcaaatcacca
caacataatgttcatgggtcgaaggacggagaggggacagaggaggaaaaggaagaggaa
gcagatatgattcataaggtggacgaggactggaagttaattgatagtgctttatcagag
gaggcggactccctggaaacactttgggtcagtgatgctgggctcacagctgagtctgag
gacgcagtggagatggttgacacagacgtgacggaggacatagaaaccgaaggttgtgat
gcaggcgaggcgctggccgacacagatggcctctcagtgggagacatctctgttaatagc
attgacgaggaggctcgctattgtgctgaacatagagacatgaggaggaggccggggaat
cttcagatcaatgaggatgaaacggatgattgtacagcagatgatttaactgagtccctc
acagatgaaccatatctcatcagcaatggaaacgtgaaggacaccgttacacaagatgga
gaggagaaagaagaagaaactgctcctggtagcgacatcacatggaacatcctgacgttt
caatgtggccataaagtgaaggaaaagggcgaaaacaaacagaacgttagtttttatgac
tttaaacatgaagaccagagacatgttgctgtagaggacggtcctcctcatgagccttac
tacgtctcctcagaggacattatcaacagagagatgatatcaaggtataaccacgctcat
cgactaccacagagtccactttcatctggaaacaacagcggagtaccagctgggaaatat
cagaaaacagcagaaaatggacaaacagagtttgtgtcctctgaggattacgtggaggtt
ggtaatcctcttcagtacagcagctacaacagggatgaaaataaggcgagagcttatctg
aaaatgactgacgagctcaaagctcagacaccggaggccttttttgatcacgtggactgc
cagccgaggttcaggcttgtgtccatctcagtgccgaccgacacggacacctcgctgaca
tcttctctctcggaaagccagctgctttctccaagtgactcagatgtctttgaggaagac
ctggagggtcacatagtgcctttcctggagcacaccgctgacacggaaccggacagcagt
gacgagcacgtctatgaggaaccagggcacagtttagaggggaacaaggtttttccttct
cataagagtacagcagagatgctcgcctgctcacgatcacatcacattcataataatgtg
gctgagttaggagtgcagtttgttcacaggccctacatgagtggaattggacaacctgca
ctgagcagcagcccaatggtcagctcaacgcggcacaagcgctacagtaaacctcaatat
ttgtccctgtacccgcgctccctctctatggagggacaggacatgcctctgggtgtctac
tacagggagggagccccgagacaaggaggtgccatctgttcatcaggaagcttctcacgg
tgctcaccgctggcatccagtggccggtccactccgacatctgtcgtggatattcctcct
ccgtttgagctggcctacatcaccaagaggcccatcactaagagttccccatcgcttttc
atcgaaggagactcgtcggagaaaaacaggaaaaagaagtcctccattaagcgtttcctg
atgcttaaatttaggcggaaaacggatagcaagccagtggatgtgaacccgtccttgttt
aagtcctcagcagaatcctaccaccacacgcccagcagactgctggatctggagagacgc
agcttcagtagctctccacagctcatttcacgctctgctagtaaacctcatgtttcttca
gaaaccaccttcttgctctacaaggagagaaaagggaactctgtggcctttctcaatcgc
agtgttgtccgggtcgagtcctttgaagaacgatcctgtgtgcctttcatacctcttccc
ctaaccaagcctcgctccatctccttccccaacgtagatacctcagactatgagaatgtt
cccgccatcagctcggactacgagaaccttcaggtgccacagcggaggccagtctgccag
gcgccgttcacaggcttctttgaccgtaccaatcgggtgatgtcctctgccaatgacact
gacggttatgtggacatgagcagcctccctggtttcaagaacacaacgcagtcacctgag
caggaaacggaaagtgcctatacagaagcctacaatatgtgctcggtggctgtctcagtg
gatgatgtcgggggagagacagcgggtgaagaagaccaaggacgcacctctgatgaggaa
gatggaggtttagacagcatttatgacagacagcttgacggccgatccagagcgttttac
atcgccaaagagctggtggatacagagagattacacgtgaaagccctcaagctcctccag
gaagactttcgggaagcagtgggggcagcagtcggggacgagggggatcctgtgttggat
gaagagaggcttcgagagattctcaacgagctgcctgatgtttacaccctgcaccgccga
atcctcagcgagctggagaatcggatccgacactgggaggagagccagaggatcgcagac
atctacctgtccagaaaagcggagttcttagttttcaccacttatatcggccactacgat
cgcagcatgagcctgctggaggacagctgccgagcctcccctgcctttgcagccattgtt
caccagtttgagcagcagagtccggctggggaaaaggtgtctctgaaacatcagctgttg
caggtcattgtgcgcgtggctcagtaccgcatgctcctcactgattacctgaacaacctt
tcccctgattccaaggagtataaagacacccaagctgctgtagctgtcgtttctgacatt
gcagatcaagcaaatgatagcttgaaacatggggagaacttattgcgcctggtcaacatt
gagtacagtgttcgtggcctgtgggatctgctgcagccgggcagggtctttctgaaggag
ggcaccctgatgaaggtcagcaggaagaatcgacagccccgccatctgtttttgatgaat
gatgtgctgctgtacacgtaccctcagcaggatgggaaatacagactgaagaatactctg
ccactcactggtttgaaggtcagtaaacccatcgtggaaaatgtccaaaatgctctgagg
attgaaggaacggacatctccataactctgtctgccagttcctttcttgaaagagaggac
tggttttacactctgagtcgcactgtgactgaacataccaggggatctgtagtattcaac
agctgctctggagaggccagagatcgtctgcggctgactctcggagagaaagcccccacg
cttgttccagtctcagaagtgatgatgtgcatgaactgcacctcagatttcagcctcact
ctccgtagacaccattgccatggctgcggaagaattgtttgttggagctgctcaaggaac
cgatatccactgaaatacatgaaagaccgcatggccaaagtgtgtgatcattgttacaat
gaactaaagaagagagggggagacgtgtctgcgttgtcgggtaagagtagccctcgtcca
aaccgctccaatcgtcctctttctaccgtgttccaaaacattcatcctcccaacatctgg
agacatcggaaaggcactgcttccttcaccccggtgacagtgtcagaagaaggctccatt
agtggcactctacagcgcagcaagacgagcaagaggaactggaagaggctgtggttcctc
ctcagagacaaggtgctttacacctaccgagcccaagaggagaaagtagcatctgagagt
ttacctctgctgggtttcacagtgaagctacctgacaagcgagaggaggaggaggccaac
atcttccagctttaccacaaaaacactttgtattactccttcagagctgaggacaactac
acagctcagaggtgggtaaatgccatggaggaagccaccgttttatag
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