Pseudoliparis swirei (Mariana hadal snailfish): 130208668
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Entry
130208668 CDS
T09868
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2-like
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
pswi04148
Efferocytosis
pswi04218
Cellular senescence
pswi04310
Wnt signaling pathway
pswi04370
VEGF signaling pathway
pswi04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130208668
04370 VEGF signaling pathway
130208668
04020 Calcium signaling pathway
130208668
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130208668
09143 Cell growth and death
04218 Cellular senescence
130208668
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130208668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208668
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130208668
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
130208668
NCBI-ProteinID:
XP_056293901
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Position
18:7933789..7944577
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AA seq
881 aa
AA seq
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MSAAGVGFTEDLSQDISQEELDFSDLFLYSSPGEDFPVGCDKDDSAALLQRDNQPPLLVV
DHHTAYISSSNQPASSQEDASSHSPTTANLSGAVFDTLGLASGPGTIPAPSPRIEITPSG
DSLSSQSLELSPGTEALWAYRECVSPASSNSSTGWPVKAYSPLASPSISPSNGGMGLSSL
DLQGIHTSSTHSSPGASPRNSAADETFLVPRHQRTASSLPHRRSRSVSPHGKRSYDPAHS
CQGATPVKQRSRSPSPIPSLHEHQRPCYIQQYQAQAEFKPQTQTSSPGLEEMLSSLSSSL
PGASPYAVVRDAHGPAQRQHCVYGEGYEQERMSSAGAEVKCETFYMLPAVWPPPPPVHHR
ALGELSAAPLPSLEWQLPSQSAQYELLIQQEPRSHHRAHYETEGSRGAVKTPSGGHPEVQ
LRGYRGTAPLGLQVFIGTADEKILKPHAFYQVHRITGKTVTTPSTERMMSGTKVLEIPLK
PKNHMRVTIDCVGILKLRNADIELRNGETDVGRKNTRVRLVFRVHIPQPGGQVVSLQAAS
HPIECSQRSAQELPAVERQDLDRCSVLGGQQMVLTGQNFTTHSKVIFSERTQDGEKIWEV
EATVDGDKTQANMLFVEVPPYRNRTISSPAKVNFYVVNGKKKHSQPQHFVYTPNIAIKAE
PLDDYQLHSCIYSDNQSLSGLSMKSLSHHLDQESNLQSLNVSPATYHLTSLDPRAHILIP
DPLDDQPVYYRASTLTNNPALYHTANQRHSNCGTALQGSQMASHPTSAPSPRVSVRNLMG
KLGEDPQVGESLKACAVSRRQSYTQTMMPRGKSPPSRYIQGQAQGKAGSRVEPLTQIDSG
RGNYEKRDPEGVTVKQENLCYAYLEDVNDIIRRDMKGHDGE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcaggtgtgggcttcaccgaggacctgagtcaagacatcagccaggaggaa
ttggacttctccgacttgtttctgtatagttcacctggggaggacttccctgtcggctgt
gataaagatgactccgctgctctccttcagagggacaaccagcctcctctgctggtggtg
gaccatcacaccgcgtacatctccagctccaaccagcccgcctccagtcaggaggacgcc
tcctctcacagcccgaccacagcaaacctgtccggtgccgtgtttgacaccctggggctg
gcttcaggacccgggaccatccctgctcccagccccaggattgagatcactccgtcgggg
gactctctcagctctcaaagcctcgagctgagccccggcaccgaggctctctgggcctat
cgggagtgtgtgagccctgccagcagtaactcctccacgggctggcctgtgaaggcatac
tctcctttggcttcacccagcatctccccatctaatggaggcatggggttgtccagctta
gacctccagggcatccacacgtcttctacccactcctccccgggagcctcgcctcgcaac
agcgccgcggacgagacctttctcgtgccccggcaccaacgcaccgcctcgtcactcccc
caccgacgctcccgctccgtctcgccgcatgggaagcgctcctatgacccggcccactcc
tgccagggggccactccagtcaagcagcgctcccggagccccagtcccatcccctcgctc
cacgagcaccagaggccctgctacatccaacaataccaggcccaagcggagttcaagccc
caaactcagacctcctccccgggcctggaggagatgctgagcagcctcagctccagtcta
cccggagcttcaccgtacgcggtggtgcgagatgcacacgggccggcccagagacagcac
tgtgtgtacggagaggggtacgagcaggagaggatgagcagcgcaggagccgaggtcaag
tgtgaaaccttctatatgctcccagctgtgtggcctcctcctcctccggtccaccaccga
gcactcggtgaactctctgcggctccacttccgtctttagagtggcagctgcccagtcag
tccgcccagtacgagctcctcatccagcaggagcccagatctcaccacagagctcactat
gagacggagggcagccgcggagctgtgaagacacccagcggagggcatccggaagttcag
ctccgcggctaccgaggcacagctccactggggctgcaggtcttcatcgggacggccgac
gagaagatcctgaaacctcacgccttctaccaagtccaccgcatcactgggaagaccgtc
accactcccagcacggagaggatgatgagcgggaccaaagtgttggagattcctctgaag
ccaaagaaccacatgagagtgacgattgactgtgtaggaatcctgaagttgaggaacgcc
gacatcgaactgaggaacggtgagacggatgttgggcgaaagaacacgcgtgtgcgtttg
gtgtttcgcgtccacattcctcaacctggaggccaagtggtgtctcttcaagccgcctct
catcctatcgaatgctcccagcgctcagctcaggagctccctgcagtcgagaggcaggac
ctggaccgatgctccgtgctcggtggtcaacaaatggtcctcacgggacagaacttcacg
actcactccaaagtgatattctcagagaggacacaagatggagagaaaatctgggaggtg
gaggccactgtcgacggagacaaaacacaggctaacatgctctttgttgaggttcctccg
tatcgaaacaggaccatttccagcccagccaaagtcaacttctacgtcgtcaacgggaag
aagaaacacagtcagcctcagcacttcgtctacactcctaatatagccattaaagcagaa
ccactggacgactaccagttgcattcatgcatctactcggacaatcagtccctgtctggc
ctatcaatgaagtcgctttcccatcacctggatcaggagagcaaccttcaatctttgaat
gtttctccagcaacatatcatctaacctctttggaccccagagcccacatcttaatccct
gatccactggacgaccagccagtttattacagagccagcactctgaccaacaaccccgcg
ctttaccacactgcaaatcaacgccacagcaactgtggtaccgccctgcaagggtcccag
atggcttcccaccctacctccgctcccagcccgcgtgtcagtgtcagaaacctgatgggc
aaactgggcgaagatcctcaagtcggtgagtcattaaaggcctgtgcggtgtcaagacgt
cagagttatacgcagacaatgatgccacgaggaaagtcgccaccttcaagatacatccaa
ggtcaagctcaaggaaaggccggaagccgagtggagcctctgacccagatcgactccggt
agaggaaactacgagaagcgagatccagagggggtcacggtcaaacaagagaatctctgc
tacgcttacctggaggatgtgaatgacatcataagaagagacatgaaaggccacgatgga
gagtga
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