Pseudoliparis swirei (Mariana hadal snailfish): 130208681
Help
Entry
130208681 CDS
T09868
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
pswi04621
NOD-like receptor signaling pathway
pswi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130208681 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130208681 (tank)
04622 RIG-I-like receptor signaling pathway
130208681 (tank)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBD
ANG-1
HIP1_clath_bdg
HAM1_C
UPF0242
IFT57
COG6_N
Motif
Other DBs
NCBI-GeneID:
130208681
NCBI-ProteinID:
XP_056293917
LinkDB
All DBs
Position
2:complement(10931466..10936150)
Genome browser
AA seq
335 aa
AA seq
DB search
MERNIGDQLNKAFEAYRQVSIEKDNAKKELQQMSEYYERYTQQLQKQIEDQQQLISKLEA
KLSATRPPSGEMKCEPCNHLLDGASAYKKIQFPENTGTVASKMPVNSCVDSQDMLNAFEA
IQGKFRQIRSLTRRQKDHLKRFHGGTDASNDQRFSMPIQCTDRTAEAERPFNSALMSAVD
IPLPPLSLASCGASPEDRDLEDSLTKLSVKFPPSADSEYDFLNSAPERHIGLTMPTKRSL
SSVPSTLTEEEPVEQPMPFVYPPSPTHSPSPSLSQESVQPLWSPELCDAGDVGTELTTPQ
SSSPDKCAFCHAVVPQDRMNGHLYSHFSPENEADN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaacatcggagaccagctcaataaagcttttgaagcttatcgccaggtctcc
attgaaaaggacaatgctaaaaaggagctgcaacaaatgagtgaatattatgagcgatac
actcaacaacttcaaaagcagatagaggaccagcagcagttgatttcgaaacttgaagct
aagttatcagcaacaaggccaccatcaggtgagatgaaatgtgagccttgtaaccatcta
cttgatggggccagcgcttataagaaaatacagttcccggagaatacgggcactgttgct
tctaaaatgccagtcaacagctgcgttgactctcaggatatgctgaatgcgtttgaagca
attcaagggaaattccggcagattcgctctcttaccaggagacaaaaagatcacctaaaa
aggttccacggaggaaccgatgcatcaaacgatcagcggttctccatgcccatccagtgc
acagaccgtacagcagaggcagagagaccctttaactcagcgttaatgtcagccgtggat
attccactcccgcctttgtctctggcgtcttgtggcgccagccccgaggacagggactta
gaagactctctcaccaaactcagtgtcaaattcccgccctctgcggacagtgaatatgac
tttctgaacagtgctcctgagagacacattggtctgaccatgcccacaaagcggtctctc
agtagtgtcccctccacattgacagaagaggagcccgtggaacagcccatgccttttgtc
taccctccatcccccacccactcaccatcaccttcgctctcccaggagagtgtgcagcct
ctctggagccctgagctgtgtgatgcaggagacgtggggacggagctgacgacgcctcag
agcagcagtcctgacaaatgtgctttctgccacgctgtggttcctcaggaccgaatgaac
ggccacctctactctcatttctcgcctgagaacgaagccgacaattga
DBGET
integrated database retrieval system
