Pseudoliparis swirei (Mariana hadal snailfish): 130208701
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Entry
130208701 CDS
T09868
Symbol
sema3fb
Name
(RefSeq) semaphorin-3F isoform X1
KO
K06840
semaphorin 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
Ig_2
PSI
ig
Ig_6
I-set
V-set
Motif
Other DBs
NCBI-GeneID:
130208701
NCBI-ProteinID:
XP_056293947
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Position
18:25248638..25309161
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AA seq
814 aa
AA seq
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MQMDGLWTVHALLALSGLVLGNPLMIHDPLAAPRVFISFKELRSTGTAHHFAYILNTSDY
RILRMDEDHDRMYVGSKDHILSLDLHDINKEPHIIHWPVSERRRMECLVSGKDAKEECAN
FIRLVEPWNRTQLYICGTGAYNPVCAFVNRGRKPQTSMYLQMAQARGRASRAAESSAVHE
TLGLKEDIFHLEPGKVESGKGKCSYDPNLNSVSALINGQLYAGVYVDFMGTDSAIFRTLG
TKTAMRTDQYNSRWLNDPTFIHVHLIPDSAERNDDKLYFFFREKSSEMGQSPVTQSRIGR
ICLNDDGGHCCLVNKWSTFLKARLICSVPGADGMETHFDELRDVYIQPTQDTKNPVIYAV
FSVSGSVFKGSAVCVYSMADIRMVFNGPFAHKEGPNYQWVAYSGKIPYPRPGTCPGGTFT
PNMKSTKDYPDEVINFMRNHPAMYNAVYPVHKRPLVVRTNVDYEFTTITVDQVTAADGNY
EVLFLGTDKGTVQKVIVLPRDDLQTEELVLEEVEVFKVPTAITTMKISSKRQQLYVSSAT
GLTQLALHRCDVYGEACADCCLARDPYCAWDGKSCSRYSASQKRSDPFRRSRRQDVKYGN
PIRQCRGFNSNTNKNTLEMVQYGVEGSSTFLECQARSPHALLKWHLQRDNSDRRKEMRSD
GRILKTEQGLLLRSLQPSDSGMYQCTGTEKSFKHTLVKLQLVVLSSRAVNNVLVEGGGGG
GGGLAPHSSSAHSSSTQWTPSAGQYKDLLTILSQPEMSLINQYCQDYWQFGDPLMGALKS
KDLKELKEQKKPRNRRHHGLVEEEEEEEVEESET
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggacggtctgtggacggtgcacgccctcctggcactgtccggcctcgtcctc
gggaatccattgatgatccacgacccgctggccgcaccccgcgtcttcatctccttcaaa
gagctgagatccaccggtaccgctcatcacttcgcctacatcctcaacacgtccgactac
cggatcctgcgcatggacgaggaccacgaccgcatgtacgtgggcagcaaggaccacatc
ctgtccctggacctccacgacatcaacaaggagccgcatattatccactggccggtgtcc
gagcgtagacggatggagtgcctcgtgagtgggaaggacgccaaagaggagtgcgcgaac
ttcatccgcctggtggagccgtggaaccggactcagctgtacatctgcgggaccggagcc
tacaacccggtctgcgccttcgtcaaccgcggacgcaaacctcagacgtccatgtatctg
cagatggcccaggccagaggacgggctagccgcgcagccgaatccagcgcggtgcacgag
acactcggactcaaggaagacatctttcatttggagccgggcaaagtggaatctgggaaa
gggaagtgctcctacgacccgaatctcaacagcgtgtcggctttgatcaatggtcaactg
tacgccggcgtctacgtcgacttcatggggacggactcggccattttccgtactttgggg
acaaagaccgccatgcgaacggatcagtacaactccagatggctcaacgaccccacgttc
atccacgttcacctcatccccgacagcgccgagagaaacgacgacaagctgtatttcttc
ttccgggagaagtcctccgagatgggccagagtcccgtgacccagtcccgtatcggacgc
atctgcctgaacgatgacggaggccactgctgcctggtcaacaagtggagcaccttcctg
aaggcccggctcatctgctcggtgccgggggccgacggcatggagacgcacttcgacgag
ctccgagatgtttacatccagccgacacaggacacaaagaaccccgtgatatacgccgtc
ttctccgtctcgggctccgtcttcaagggctcggcagtgtgcgtctactccatggccgac
atccgcatggtcttcaacgggccgttcgcccacaaggagggtcccaactaccagtgggtg
gcctacagcgggaagatcccctacccacgccccggcacgtgccctggaggtacgttcacc
ccgaacatgaagtccacgaaggactatccggatgaagtgattaacttcatgaggaatcac
cctgccatgtacaacgccgtgtacccggtgcacaagcgccccctggtggttcggaccaac
gtggactacgagttcaccaccatcaccgtggaccaagtgacggctgcggacggcaactat
gaagtgctcttcttaggaactgacaagggaacagtgcagaaagtcatcgttctgcccaga
gacgacctgcagaccgaggagctggtccttgaggaggtggaggttttcaaggtcccgact
gcaatcacaacgatgaagatctcatccaaaaggcaacagctgtacgtgtcctcggccacc
gggctgacccagctggctcttcaccggtgcgatgtgtacggcgaggcctgcgccgactgc
tgcctggccagagacccgtactgcgcctgggacggcaagtcctgctcccggtactccgcc
tcccagaagaggtctgaccccttcagacgcagccggcggcaggacgtcaaatacgggaac
cccatccgccaatgccgaggcttcaactctaacaccaataagaacactctggagatggtg
cagtacggggtggaggggagcagtaccttcctggagtgtcaggcccgctctccacacgct
ctcctcaaatggcatctgcagagagataacagcgaccgcaggaaagagatgcgctccgac
ggtcgcattctgaagacggagcagggcctcctcctgcggtccctgcagccctccgactcc
ggcatgtaccaatgcacgggcacggagaagagcttcaaacacacgctggtcaagctgcag
ctggtggtgctgtcgagccgggccgtcaacaacgtgctggtggagggcggaggaggagga
ggaggggggctggcgccgcactcctcctccgcgcactccagcagcacccagtggaccccc
agcgcgggccagtacaaggacctgctgaccatcctgagccagccagagatgagcctgatc
aatcagtactgccaggactactggcagttcggagacccgctgatgggcgccctcaagtcc
aaagacctgaaggagctcaaggagcagaagaagccccgcaaccgccggcaccacgggctg
gtggaggaagaggaggaagaggaggtggaggagtcagagacatga
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