Pseudoliparis swirei (Mariana hadal snailfish): 130208758
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Entry
130208758 CDS
T09868
Symbol
c1galt1lb
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00512
Mucin type O-glycan biosynthesis
pswi00514
Other types of O-glycan biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
130208758 (c1galt1lb)
00514 Other types of O-glycan biosynthesis
130208758 (c1galt1lb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130208758 (c1galt1lb)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
130208758 (c1galt1lb)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
Type 3 chain
130208758 (c1galt1lb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
130208758
NCBI-ProteinID:
XP_056294038
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Position
18:16674564..16683306
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AA seq
394 aa
AA seq
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MKALGSRFSFCAGFVVGTFTLYVFLRQVCFERTLSTQQASSFDQQLEEDKTIWKKDRSAL
FNLKHPHHTGEDSGMADELYKKVRILCWVMTGPNNLEKKARHVKSTWSRHCNVVVFMSSV
DDPDFPTVGLGTKEGRDQLYWKTIRAFHYAYEHHSNDADWFLKADDDTYVIVDNLRWVLS
NHTPEEPIYFGRRFKPYTKQGYMSGGAGYVLSKEALRRFVEGFKSKLCTHTTSVEDLAMG
QCMEKVGVLAGDSRDTLLRETFHPFVPEQHLTAKFPKSFWYWSYCYYPISEGPNCCSDVS
VSFHYIDASHMYLLEYYTYHLRAFGYRYRYQPPAPLGYNIEQSSSHDAAEGKKELTSHEK
GQGEGDDPSRTDKKQDIDPPPAAGKDPPAVPSGK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctcggatccagattctccttctgtgcgggtttcgtggtgggcaccttcacg
ctgtacgtgtttctgcgtcaggtgtgcttcgagaggaccttgtcgacgcagcaggccagc
agcttcgatcaacagcttgaggaagataagacaatatggaagaaggacaggtctgctctt
ttcaacctgaagcaccctcatcatacaggtgaggatagcggcatggctgatgagctctac
aaaaaggtgcgtattctttgctgggtcatgaccggacccaacaacctggagaagaaggct
cgccatgtgaagtctacttggagtcgccactgcaatgtcgtggtcttcatgagctctgtg
gatgacccggacttccccacggtgggcttgggtacaaaggagggtcgagaccagctgtac
tggaaaacgatccgggctttccattacgcctacgaacaccacagcaacgacgcggattgg
tttcttaaggcagacgacgacacctacgtaattgtagacaacctgcgttgggttctttcc
aaccacacgccagaagagccgatttactttggccggagattcaagccctacaccaagcag
ggctacatgagtggcggcgcgggctacgtgttgagcaaagaggctctgcgcagatttgtt
gaaggatttaaaagtaaactctgcactcacacgacctctgtagaggacctggcaatgggg
cagtgcatggagaaggttggagtgctggcaggggactccagagacactttgctcagggag
acgtttcacccatttgtccccgagcagcatctcactgccaagtttcccaagagcttctgg
tattggagctactgctactacccaatctcagagggaccaaactgctgctcggacgtgtcc
gtgtcattccactatatagatgcttcacacatgtatttattggagtactacacatatcat
ctgcgtgcctttggctacagatatcgctaccagccccccgccccactagggtacaatatt
gagcagtcaagttcccacgatgccgcagagggaaaaaaagagctgacttctcatgaaaaa
gggcaaggagagggggatgatccatccaggactgacaagaaacaggatatagatccccct
cctgctgccggtaaggaccctcctgctgtcccatcaggcaaataa
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