Pseudoliparis swirei (Mariana hadal snailfish): 130208761
Help
Entry
130208761 CDS
T09868
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130208761 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208761 (gli1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
130208761 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
130208761
NCBI-ProteinID:
XP_056294043
LinkDB
All DBs
Position
18:10307619..10369397
Genome browser
AA seq
1477 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSQPSRGLVPSDQSPYSDVSSLRGSLHNGPPQDCCAMYNPMTP
SMTHGPGQGIGHCMDQYMRPPQAPPPLSMMGHRGMPPPEGGNSTPYCNQNNMMSSHHNFC
QFQLGSDQIGSGDGSRFATPRSILKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVN
ARCNPNGASSYGHLSVSTMSSSLGYSSNINCQSRQQVSMYGGGGGTPLGGHTPGPCQASR
LPPHNPRLHAPPKHGHLKTEPGLGGVMDVMNLKSLEERSEGDVASPSSTGTQDPLLGLLD
GRDDLDKDDGKPEPEAIYETNCHWESCSKEFDTQDQLVHHINNEHIHGEKKEFVCHWQEC
SREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEH
EGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITK
KHRGDTGPRPLGSAMTPGGQSSELLLEKEETRREDCKLLAPETALKSQTSPGGQSSCSSE
RSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGVAGGGGEPVGVGTMGMSAQALKRLENL
KIDKLKQIRRPTPPSRCTNNKLPALPGPGENMGMCAPSPLLSNRRVMELSNHELGGGTSL
GCSSNDRRGSGTSSLSSAYTVSRRSSMISPYLSSRRSSEVSQMGGTGGGGCHLLSPEQSG
GDPLSPETNRRGAPCPGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNMEQPGTPA
RRRGVFSEYQGQPLPPFLQQGGPRRHSSNTEYGTGVIYPHQAPGNNSRRASDPVRSVADP
QALPKRFNSLNNIAMMGRRNALQHRGSETSLARHLYSPRPPSITENVMMEALGMEAHLSP
VDGRDRAMMLPPGERSFMGYQQQQQTLVGVGGSLGNQLSPSHDSLSCPDQGYMQGHYQNQ
AGENTSRAGGNPMGQARSIPSEGMSKTLLQQAEYSMSTCQLSPSGPHYPSIGQGGDAGGP
WSDSHSQIQTSNHALQNQRAMQNTDPSLQPQQTQTHFNNQTGIYNSPDGTHKLTIKPEQQ
FHPGMGGVNACQSAKLQQQRMLLQQPQVYPQQTGQVLMRNSNNPSCEFQGPNLNSFPIAG
GLSLGCAGTVLSDGKRSETPMMQVKEMMVRNYVQSQQAIMCEQQQEQQQQSGIKPPPLSD
SVDMSAQTAMMQHSPQHQNQNLYASQPYPSYPNQNLVISPPAHSRGPSSVTPKDQQLAGL
QGSCYGQEMVVPRPPQGRKPLSRQNSLSQVGGSYLGSPPQLSPVHSTSSPRRAVRLPPVQ
HPQHQQNEIFSPSNNNIYYSGQISMDMDKHMDPQIGPCLNQQHSVGSNLDPTGGTKPAPM
TPYPESGPISNALENLDLDNARIDFTSIIDDAESSSFSPINNPLHGQSSSQASSRLTTPQ
TSVSLAAGSGLSNMAVGDMTSMLTSLAGENKFLNTLS
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtaccactacgagacctcacccagccag
ccctccagaggcctggtcccatcagaccagtctccctacagtgatgtgtcctcgctgcgt
ggctcgctccacaatggccctccccaggactgctgcgcgatgtataatcccatgactccc
agtatgactcatggaccagggcaggggattggccactgcatggatcaatatatgaggccc
cctcaggccccgccgccactcagtatgatgggccacaggggcatgccgcccccagagggt
ggcaatagcaccccttactgtaaccagaacaacatgatgtcctctcatcacaacttctgc
cagtttcagcttggctctgatcagattggctcaggtgatggctcgaggttcgccacacct
cgttccatactgaagctgagtaaaaagagagctctgtccatctcccctctgtctgatgcc
agtgtcgacctgcagacggtgatccgaacatcccccaactccctggtggcctttgtcaac
gctcgctgcaacccgaacggggccagttcctacggccacctctctgtgagcaccatgagc
tcgtccctcggctattccagcaatataaactgccaatccaggcaacaagtgtccatgtat
ggaggaggtggggggacgcctctgggtggacacacaccaggtccctgccaagcctcccgc
ttaccgccccacaatcctcggctccacgctccacccaagcatggacacctgaagacagag
ccagggctgggaggtgtcatggatgtcatgaatctaaagagcctggaggagcggtcagag
ggagatgtggccagtccttcttccactggcactcaggatcctctcctgggtctactggat
ggcagagatgacttggacaaggatgacgggaagcctgaaccagaggccatctatgaaacc
aactgtcactgggagagctgcagcaaggaatttgacacgcaagaccagctcgttcatcac
atcaacaatgagcacatccatggagaaaagaaggagtttgtgtgtcactggcaagaatgc
tctcgagaacagaggcctttcaaagcccagtacatgctggtggttcatatgcgcagacac
acaggagagaagccacataagtgcactttcgagggctgtaataaggcctactctcgcctg
gagaacttaaagacccacctgcgctctcacactggagagaaaccatacgtgtgtgaacat
gaaggctgtaacaaggccttctctaatgcttcagaccgggccaagcaccagaaccgaact
cactccaatgagaaaccttatgtgtgtaagatccccggctgcactaagcggtacacagat
ccgagctctttgcgtaaacatgtgaagacggtacacggccctgaagcccacatcaccaag
aaacatcgcggagacacaggacctcgaccccttggttcagctatgacccctgggggccag
agctctgaactactgctggagaaagaggagacacgcagggaggactgcaagctgttggct
cctgagactgctctgaaatcccagacaagccctggtggtcaatcatcctgcagtagcgaa
cgttctccactggggagcgccaacaacaatgacagcggggtcgagatgaacctgaacgca
gctggcagtctggaggatctcacagcactggaggatggagttgcaggtggaggaggggag
ccagtcggtgtagggacgatgggaatgtctgctcaggctttgaagaggctggagaacctg
aagattgacaagctgaagcaaatccgcaggccgacccctcccagccgctgcaccaataac
aagctacctgcacttcctggtccaggagagaacatgggaatgtgtgcaccttctccactg
ctctccaatcgcagagttatggagctgtccaatcacgagttaggaggtggcacatcgctt
ggctgctcttctaacgacaggagaggcagcggcaccagcagcctaagctctgcttatacc
gtcagtcgtcggtcctccatgatttctccgtacctgtccagccgccgctccagcgaagtc
tcccaaatgggaggaacgggagggggaggatgtcacctcctcagcccagagcagagtggg
ggagaccccctgtctcctgagaccaatcgcagaggtgctccatgtcccggaggaggattg
ccagggcttccgaacttaacacccgcccagcaatacagcctaaaggccaaatatgctgca
gcaactggtggaccaccacctactcctttacccaacatggagcagccaggcactccagcg
agaagaagaggtgttttcagtgaataccaggggcagcctctgcctcccttccttcaacaa
ggtggtccacgacggcacagttccaacacagaatatggcacaggtgtcatctaccctcac
caggctccaggtaacaacagcaggcgagccagtgacccggttcgatcagtagcagatcca
caagctctccccaagcgcttcaatagccttaataacatagccatgatgggcagaaggaat
gcgctgcaacaccgtggctctgaaaccagcctcgcccgccacctgtactcccctcggcca
ccgagcattacagagaatgtaatgatggaggccttgggtatggaggctcacctttccccc
gttgatggcagggatcgcgccatgatgctgccccctggggagaggagcttcatgggatac
cagcaacagcagcaaactcttgtaggagttggaggttctcttggaaaccaactgtcccca
agtcacgactctctgagctgcccagaccagggttacatgcaggggcactaccagaaccag
gcaggggaaaacacttccagggctggtgggaatccaatgggtcaagcacggtctattccc
tcagagggcatgtcgaaaacacttctccagcaggccgagtacagtatgagcacctgccag
ctcagtccctcaggcccccactacccgagcataggccagggtggtgacgctggtggccct
tggagtgattcccacagccaaatccaaacttccaaccatgctctccaaaaccagcgagca
atgcagaatacagatcctagcctgcagcctcaacagacacagacccacttcaacaatcag
acgggcatctacaacagtcctgatggaacccacaaactcaccatcaagccggagcagcag
ttccaccctgggatgggaggtgtaaatgcctgtcaaagtgcaaagctccaacagcagcgg
atgctcctccagcaacctcaggtttacccacaacaaacgggccaggtcctgatgaggaac
tctaacaatcccagctgtgagtttcaaggtccgaacctgaactccttccccattgcaggg
ggcttgagcttgggctgtgctggcactgtactctccgatggcaagcggtcagaaacccca
atgatgcaggtgaaggagatgatggtgaggaactatgtacagtcccagcaagcaatcatg
tgtgagcagcaacaagaacagcaacagcagagtggaataaaaccacctcctctatctgat
agtgtggatatgagtgcccagacagcaatgatgcagcacagtccacagcaccaaaatcag
aatctttacgcaagccagccttatccgtcctaccccaaccagaacctggtcataagccct
ccagcccacagcagaggacccagctctgtgacacctaaagaccagcagctggcaggtctc
caaggctcatgttatggccaggagatggtggtccccaggccccctcagggacggaaacct
ctcagccgccagaacagcctgtcccaggtaggaggaagctaccttggtagcccaccccag
ctcagccctgtccactccacttccagccccaggcgagcggtccgacttcctccagttcag
catccacagcaccagcaaaatgaaatattctctccttccaataacaacatatactattca
ggtcagataagcatggatatggacaaacacatggacccccagattggaccttgtctcaac
cagcagcacagtgtggggtccaacttggaccctacagggggcacaaagcctgcccccatg
accccctatcctgaatctggccccatctccaatgccttagaaaacctggacctggacaat
gctcgcatagacttcacctctatcattgatgatgctgaatcttcctctttcagcccaatc
aacaatccccttcatggccagtcttcctcccaggcctcatcccgcctcaccaccccccag
acttctgtcagcctagctgcaggctctggtctgtccaacatggctgtaggcgacatgacg
tccatgcttacctcgctggctggggagaataaatttctgaacacactgtcgtag
DBGET
integrated database retrieval system
