Pseudoliparis swirei (Mariana hadal snailfish): 130208806
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Entry
130208806 CDS
T09868
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208806
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
130208806
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
130208806
NCBI-ProteinID:
XP_056294114
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Position
18:complement(17163631..17167326)
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AA seq
426 aa
AA seq
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MERIPSAQPPPLSKHQADLSDLQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEQLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILALQSGM
QIDQPAVNQEKSEEMFCSGFHICAKEMLQYLGNHETDGDFTPSHVINYLHKLAAEVLQSP
VRPRTPPSPQTEDIPAYLQNQPHKEMPTSLPPKPIEGYGRNCVPVIQRAHAPMSSEQSGS
DTDTDSGYGGELEKTESGVQQGRPDYYGNGSHLKRALGERQSSSIKREDEEPRHKRPRVE
SSEDELLSGGESSATSSASSGYGSYMSNRPTLPHPLCMPFYLIPPSAAAYLPMLEKCWYP
GAMPMLYPGMGGSAPTMHNERPHPPQLMMSPRGGSPVPAISQTPMDSPALLQALKQVPPL
NQETKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatcccaagcgcgcaaccacctcctctgtccaaacaccaggcggatctgtcg
gacttgcaggggatggatttcccgatgtatgtttataaacccagacgaggaatgaaaaga
ggagaggagagcaaggaaacctacaagctgcctcacagacttattgagaagaaaagacgt
gaccggataaacgagtgcatcgctcagctgaaagatttattaccggagcagttgaaactc
acgactctgggccatctggagaaggctgtggttttagagcttacactcaagcatgtgaaa
gccctcacttctcttctggagcagcagcagcagaagatcctcgctctgcagagcggcatg
caaattgatcagcctgctgtcaaccaggagaagtcagaggagatgttttgctctggcttc
catatttgtgccaaggagatgcttcagtatctaggcaatcatgaaactgatggagatttc
accccatcccatgtgatcaattacctccacaagttagccgcagaggtgctgcaaagtccg
gtccgaccccgcactcctcccagcccgcaaacggaagacatccctgcctacctccagaac
caacctcacaaggagatgcccaccagcttaccccctaaacccattgagggctatgggagg
aactgtgtgcccgtcatccagcgggcgcacgctccaatgagcagtgagcagagtggcagt
gatacggatacggacagcggctatggtggagagctggagaagactgaatctggggtgcaa
cagggacgtccagattactacggtaatgggagccatctgaagcgagcactcggcgagagg
cagagctccagcatcaaacgggaggatgaagagccgcgccacaaacgaccccgggtggag
tcatcagaggacgagctgctctctggaggagagtcatcagcaacatcatcggcctctagc
ggttatggcagttacatgagcaaccggccaactcttccacatcctctctgcatgcctttc
tacctcattccaccttctgctgcagcctacctaccaatgctggagaaatgctggtacccc
ggggccatgcccatgctctaccctggcatgggaggctctgcacccaccatgcacaacgaa
agaccgcatccacctcagctaatgatgtctcccagaggaggctctccggttccagccata
tctcagacccccatggactcccctgccctccttcaggctttaaagcaggtaccacccctc
aaccaggaaaccaaagactga
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