Pseudoliparis swirei (Mariana hadal snailfish): 130208807
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Entry
130208807 CDS
T09868
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130208807 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130208807 (stau1)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130208807 (stau1)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130208807 (stau1)
mRNA cycle factors
Stress granule specific factors
130208807 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
130208807
NCBI-ProteinID:
XP_056294115
LinkDB
All DBs
Position
18:complement(13503893..13511733)
Genome browser
AA seq
729 aa
AA seq
DB search
MSQLQLQFQCPASPMPAACGPLQLGQPQSCYSIPCSSGTLPSESASQPIRSSALPAGSAT
PYNTTIVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKVLVIFTEKQCCCV
TSSCHSEGQSIVFPVSCVCQIFSVRLTLGDQHWEAEGTSIKKAQHSAADSALTETTLPKP
TVRTPRNTGKHPDGMTHTMELNALCMKLGKKPMYKPIDAYPGMRPPNFNYNVRAPGPYQR
SMQQYYYPFPPVGPMIYHMELSIGGQQFTGKGRTRQLAKHEAASKALKVLHKEPILQQLP
VMNGEPEEENLNKSEISQVFEIALKRNLPVNFEVLKEEGPPHMKSFVVRVTVGEFPGEGE
GKSKKIAKKLAAAAVLDELRRLPHIPSVEKTLPRIKKKTKSIIKLQTSPEYGQGMNPISR
LAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVTVCDQTAEGMGPSKKVAKRNAAEKMLE
LLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVTFFEPGSIEEVALSSKEEDFRLPYISR
QQLPAGILPMVPEVAQALGAFHTSQAKDYSRAVPNPGNATITAMIANELLYTGTSLTAET
ILKNKNNLNHLPHGPLTRPSEQLGFLASVQSLQVEYKDFPKNNKNEFVSLINCSSYSPLI
SHGIGKDVESCHDMAALNILKLLSELDQQSSERTGNGPVSRCGKQEMEGELRLKQANSST
LAQTLDGTV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagctccagtttcagtgtccggctagccccatgcctgctgcctgtggc
ccactgcagctggggcagccacagtcttgctacagcatcccctgttcatcaggcactctc
ccctcggagagcgccagccagcccatcaggagctcggctctccctgcaggctcagccact
ccctataataccaccatagtatctaacatggcaaaccctaaagagaagacccccatgtgt
ttggtgaatgagttagcccgtttcaacaagattcaaccggagtataagctgctgtgtgag
caaggaccagctcactccaaggtactagtcatttttacagagaaacaatgctgttgtgtc
acaagttcttgccacagtgaaggccaatctattgtatttcctgtctcctgtgtctgtcag
attttctcagttaggctcacactgggagatcagcactgggaggcagaagggacaagcatc
aagaaagcccagcattctgcagctgattctgcccttactgagacgacacttcccaaaccc
accgtgagaacgccccgcaacacaggcaagcacccagatggcatgacacacaccatggag
ttaaatgcactatgtatgaagcttggtaaaaagcctatgtataaacccatcgacgcatat
ccggggatgagaccaccaaacttcaattacaacgtccgggctccaggaccttaccagcgc
tctatgcaacagtactattacccatttcctcctgtggggccaatgatataccatatggag
ctttccatcggaggccagcagtttacagggaagggacgcacgcggcagttggccaaacac
gaagctgcgtccaaggccctaaaagtgcttcataaggagccaatattgcaacagttgcca
gtgatgaacggagagcccgaggaggagaacctcaacaaatcagaaattagtcaagtgttt
gaaattgcactgaaacgcaatttaccggtcaactttgaggttttaaaagaagaaggccct
ccccatatgaagagttttgtagtgcgcgttacagttggggagtttcctggagagggcgaa
ggaaagagtaaaaaaattgccaagaagctagcagcagctgcagtgctggacgagttgagg
aggctaccccatatacccagtgtggaaaagacactgccacgcatcaaaaagaaaacaaaa
tccatcattaagctgcagactagcccagaatatggccagggaatgaatcccatcagccgc
ctggctcagatccagcaggccaagaaggagaaggagccagagtacagcatggtgacagag
agaggtctacctcgtcgcagggagttcgtcatgcaggtgacagtgtgcgaccagactgcc
gaaggaatgggaccgagtaagaaagtggccaagaggaacgcagcagagaagatgctggag
ctcttgggatataaagtgcctcagcctcagcctccgaaaccggcacttaaaacagatgaa
aagaccccagtgaaaaaacctggtgatgggcgcaaagtgaccttttttgagcctggctct
atcgaggaggtggcattgagttccaaggaggaggacttccgcctgccttacatcagtcgc
cagcagctgcctgcaggtatcctgcccatggtccctgaagtggctcaagcactcggggcc
ttccacacatcccaggcgaaggactacagtcgagctgtacccaacccaggcaatgccaca
atcactgccatgattgccaacgagctgctctacacagggacgtcactaactgctgagact
atcctaaagaacaagaataatctgaaccaccttccccacggacccctcaccaggccttca
gaacagctcggctttcttgcatcggtgcaaagcctgcaggtggaatacaaagattttccc
aaaaacaataaaaatgagtttgtatcactcattaactgctcctcctattcaccgctcatc
agtcacgggatcgggaaagatgtagaatcctgtcatgatatggccgcattgaatatattg
aagctgctgtcagagttggatcaacagtcaagtgagaggacaggaaatggaccagtgtct
cgatgtggcaaacaggaaatggagggtgagctgcgcctcaaacaagctaactcgagcaca
ctggcacagaccctggacggcactgtttag
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integrated database retrieval system
