Pseudoliparis swirei (Mariana hadal snailfish): 130208811
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Entry
130208811 CDS
T09868
Symbol
ago3b
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130208811 (ago3b)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130208811 (ago3b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130208811 (ago3b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130208811 (ago3b)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130208811 (ago3b)
microRNA pathway
RISC loading complex
130208811 (ago3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
130208811
NCBI-ProteinID:
XP_056294165
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Position
1:complement(4437190..4454435)
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AA seq
882 aa
AA seq
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MEIGTTGDVGAPAEPKVLFSLPKRPCYGTLGKPIKLLANCFQVEIPKIDVYLYEVDIKPD
KCPRRVNREVVDSMVQHFKVTIFGDCLPVYDGKRSLYTVSPLPVATGGVDLDVTLPGDGG
KDRPFKVTIRFVSLVSWHMLHEVLTGRAVAEPVDLEKPISTNPVHAVDVVLRHLPSMKYT
PVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMC
EVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASLQTFP
LQLESGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVPGQRCIKK
LTDNQTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFRVRDEMAQVTGRVLPA
PMLQYGGRVSSEPFMSQQINPALSLQNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFA
TQRQCREEILKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQL
IIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNI
LVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQE
VIQDLASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKE
YQPGITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQ
GTSRPSHYHVLWDDNCFTGDEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHL
VDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTLTTMYFA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacaacaggagacgttggagcaccggctgaacccaaagtccttttctcg
ttgccaaagcggccttgctatggcacccttgggaagcccatcaagcttttggccaactgc
ttccaggtggaaatccccaagatcgacgtctatctgtacgaggtggacatcaagccggat
aaatgtcctcgccgggtcaacagggaggtggtggactccatggtccagcatttcaaggtg
actatcttcggcgactgtctgccagtttacgatgggaagagaagcctctacactgttagc
ccacttcctgtcgccactggcggggtcgatctggacgtcaccctgccaggtgacggtggg
aaggaccgccccttcaaagtcaccatcaggttcgtgtcgttggtcagctggcacatgctg
cacgaagtcttgacgggacgcgccgtggccgagccggtggacctggagaaacccatcagc
accaaccccgtccacgccgtggacgtggtcctaagacacctgccctccatgaagtacacg
cccgtcggacgatccttcttctcggccccggagggctacgaccacccgctcggtggaggg
agagaggtctggtttggattccatcagtcggtgcggccagctatgtggaaaatgatgctc
aacatcgatgtgtcagccacagctttctacaaagcccagcccgtcatccagttcatgtgc
gaggtcctggacatccacaacattgacgagcagcccaggcctctcaccgactctcacagg
gtcaagttcaccaaagagatcaaaggtcttaaagtggaagtgacacactgtggaaccatg
cgcaggaagtacagagtctgcaacgtgacacgacgccccgccagcctccagacatttccg
ctgcagctggagagcggtcagacggtggagcggaccgtggcgcagtacttcagagagaag
tacagcctgcagctgaagtacccccacctgccgtgtctgcaggtgggccaggaacagaaa
cacacctacctgcccctggaggtgtgcaacattgtacctggacagcgctgcatcaagaaa
ctaacggacaaccagacatcgaccatgatcaaagctacagcccgctctgcccctgaccgg
caggaggagatcagcagactggtgaggagcgcgaattacgaggccgacccgttcgtccag
gagtttcagttccgcgtgcgagacgagatggctcaggtgacgggccgcgtgctgccggcc
cccatgctgcaatatggcggcagagtgagctccgagccttttatgtcccagcagatcaac
cctgcgctgtcattgcagaaccgcacggtggccacgcccagccacggcgtgtgggacatg
agggggaagcagtttcacaccggagtggagatcaagatgtgggccatcgcctgcttcgcc
acccagaggcagtgccgagaggagatcctgaagagtttcactgaccagctgcgcaaaatc
tcaaaggacgccggcatgccgatccaaggccagccgtgtttctgtaaatacgcccaggga
gccgacagcgtggagcccatgttcagacacctgaagaacacctacgccgggctgcagctc
atcatcgtcatcctgcccgggaaaacacccgtctatgctgaggtgaagcgcgtgggcgac
accctcctcggcatggcaacccagtgtgtgcaggtgaagaacgtggtgaagacgtcccct
cagaccctctccaacctctgcctcaagatcaacgtcaagctggggggcatcaacaacatc
ctggttcctcaccagcgaccatctgtgttccagcagccggtcatcttcctcggggcggac
gtcactcatcctccagcgggagacgggaagaagccgtctattgcagcggtggtgggcagc
atggacgcccaccccagcaggtactgcgctacggtgcgcgtccagaggccgaggcaggag
gtcatccaggacttggcctccatggtgcgagagctcctgatccagttctacaaatcgacc
cgctacaagccgaccaggatcatcttctacagggacggcgtgtcggaggggcagttcaga
caggtgctgtactacgagctgctggccatccgggaggcgtgcatcagtctggagaaggag
taccagccgggcatcacttacatcgtcgtgcagaagcgccaccacacgcggctcttctgt
gcagatcgcaacgagcgggttggacgaagtggaaacattcctgccggcaccaccgtggac
accgacatcacccacccctacgagtttgacttttacctctgcagtcacgctggaatccag
ggaacgagccggccgtcccactaccacgtcctgtgggacgacaactgcttcaccggcgac
gagttccagctcctcacctaccagctgtgccacacttacgtccgctgcacgcgctccgtc
tccatcccggcgccggcctactacgcccacctggtggccttccgcgcccgctaccacctg
gtggacaaggagcacgacagtgcggagggcagccatgtctcggggcagagtaacggcagg
gacccccaggcgctggccaaggcggttcagatccaccacgacacgctgaccaccatgtat
tttgcctga
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