Pseudoliparis swirei (Mariana hadal snailfish): 130208825
Help
Entry
130208825 CDS
T09868
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130208825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130208825
03036 Chromosome and associated proteins [BR:
pswi03036
]
130208825
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130208825
Coactivators
SAGA/TFTC/STAGA complex
130208825
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130208825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
130208825
NCBI-ProteinID:
XP_056294148
LinkDB
All DBs
Position
18:complement(26331065..26341812)
Genome browser
AA seq
821 aa
AA seq
DB search
MDASTASTDSTAGRDPDGTLVAGGAATPPLTNHGGKVVSHSAQTFNGSRIVNSEYSGSGD
SLVGATPTSGTGGGGSVISVAGGAAVSKGPAGGAITHPASSSVIQTPLATPPSGVRPPAQ
PSGATLNGTDDAGRAAAVTTTGHAGYGIRTPLVNSSQPSGPVPFTAGSHIIKAEAPTTTT
MQTVPPPPAVTHGAVRFPSTVALTPQMLAPRLPQTSPGQPSIGLHNIQLPPGMVLVRSES
GQLLMIHQQALAQIQAQAQGGMAPPTPTPTSMPPGQAPGNIIRHEVAPSAIRQGCPGPAP
LPATTTLHRPPILQSSVGAAVPGITPRTVGHTAGTTVTSVTISKETMENVKKCKNFLSTL
IKLASSGKQTTETAASARELVKDLLEGRLEAEDFTSRLYKELNSSPQPYLVPFLKRSLPA
LRQLTPDSAAFIQQSLVPQPAAGPVPSTSPIPTTVVLGSPAARLAAPVSRPQFQPVISKP
GLTPSLVMQAQQQRAMFKPQAALPATPMVTLRNQAPGRTMLGQQPVQLKALQPVPVRPEL
SSFSRHASAASYSLAQKIKLREAVGKDEDDINDVTSMAGVSLSEESANILATNSGLVGAV
THSCKDVAFLPFATLQRRMQEIGRRYGVSDLGAEVVNLVSHAAQQRLQNLLGKLSQVAQQ
RNGNFKEDDACEQSSDVRAQLRFFEQLDHLEKQRKEGQEREILLKAAKSRARQEDPEQLR
LKQKAKEMQQQELAQIRQKEANFTALAAIGPRKKKMPDSPSSSAGAEGSGPGPSQSGGAA
AAGSRPTRQRITRVNLRDLLFCLENDRSTSRSHFLYKGFLK
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtcgacggccagcacggactccaccgcgggacgcgaccccgacgggacactt
gttgctggcggcgccgctactccgccgctcacgaaccacggggggaaagtcgtctcgcac
tcggcgcagactttcaacgggagccgcattgtgaactctgagtattcaggaagtggcgac
tctctcgtgggggcgacgccgacgagtggcaccggcggcgggggtagcgtgatatccgtc
gccggcggagcggcggtgtcaaaaggtccggccggcggcgccataacgcaccccgcgtca
agcagcgtgatccagacgccgctcgcgaccccgccgagcggcgtcaggccgcccgcgcag
ccctcgggggcaactttgaacgggacagacgacgcggggcgagccgcggcggtcacgacg
acgggtcacgcgggttacggcatccggaccccgcttgtcaacagcagccagccgtccggc
ccggtgcccttcaccgccgggtcgcacatcatcaaggcagaggcgcccacaacaacaaca
atgcagacggtccccccgccgccggctgtcactcacggtgctgtccggtttccgtcgacg
gtagccctgacgccccagatgttggccccgaggctcccccagacctcaccgggacagccc
agcatcggcctgcataacatccagctcccccctgggatggtgcttgtgcgcagtgagagt
ggacagttgctgatgattcatcagcaggctctggcccagatccaggcccaggcccaggga
ggcatggcacctccgacccctacaccaacaagcatgcctcctggacaggctcctggaaac
atcatcagacacgaagtcgcccccagcgcaatccgtcaaggctgtcccggcccggcgcca
ctccctgcgaccaccactcttcacagacctcccatccttcagagctcagttggggctgca
gtaccaggaattacccccaggactgtcggccacacagctgggaccacggtgacctcagta
acaataagcaaagagacgatggagaacgtgaagaagtgtaagaacttcctgtctacattg
atcaagctggcgtccagcgggaagcaaaccacggagactgcagccagcgcgagggagctg
gtcaaggacctgctggagggcagactggaagcggaggatttcaccagcagattgtacaaa
gagctcaactcctcaccccaaccgtaccttgtgcctttcctgaagagaagcctcccagcc
ctgaggcagctcaccccggactcggcagccttcatccagcagagtctggtcccccagccg
gctgcgggtccagtgccctccacctcacccatccccaccacggtggtcctgggcagcccg
gcggcccgtctcgcggctccggtcagcaggcctcagttccagccggtcatcagcaaaccg
ggactgaccccctcactggtcatgcaggcccaacagcagagagcaatgtttaaacctcag
gcagccttaccggcgacccccatggtgactctcaggaatcaggcccctggccgcaccatg
ctggggcagcagccggtccagctgaaggcgctgcagccagttcccgtgaggccggagctg
tcgtccttttctagacacgcctccgctgcgtcctacagcctggctcaaaagatcaagctg
agggaggcggttggcaaagatgaggacgacatcaacgacgtgacctccatggccggcgtg
agcctctccgaggagagcgcgaatatcctcgcaaccaactctggactcgtgggcgcggtg
acgcattcctgtaaggacgtggcgttcctccccttcgccaccctgcagaggaggatgcag
gagataggtcggcggtacggtgtgagcgacctgggtgccgaggtggtgaacctcgtctcc
cacgcggctcagcagcgcctccagaacctgctggggaaactttcccaagtggctcagcag
agaaacggcaacttcaaggaggatgacgcgtgtgagcagagcagtgacgttcgggctcag
ctcaggttctttgagcagttggaccatctggagaaacaacggaaggagggccaggagaga
gagatcctcctgaaggcagctaagtctcgagcgcggcaggaggacccggagcagctgcgt
ctgaagcagaaggccaaagagatgcagcagcaggagttggctcagatcaggcagaaggag
gccaacttcacagcgctggcagccatcggtccccggaagaagaagatgccggactctcca
tcctcctccgccggagccgaggggtccggtccgggtccctctcagtccgggggggcggcg
gcggcgggctccaggcccacgcggcagcgcatcacgcgcgtcaacctcagggacctgctc
ttctgcctggagaacgaccgatccaccagccgctcccacttcctctacaagggcttcctc
aaatag
DBGET
integrated database retrieval system
