Pseudoliparis swirei (Mariana hadal snailfish): 130208855
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Entry
130208855 CDS
T09868
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130208855 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130208855 (stx16)
Membrane trafficking [BR:
pswi04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
130208855 (stx16)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin_2
MCPsignal
MTCP1
MbeD_MobD
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
130208855
NCBI-ProteinID:
XP_056294188
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All DBs
Position
18:complement(17987033..17994737)
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AA seq
321 aa
AA seq
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MATRRLTDAFLLMRNNSIQNRQILAEQVSTYDPRLSTRSNAAELDEMADDRMALVSGISL
DPEAAIGVTKKLSPKWIEGIDEIQYEITRVRQKMKDLAVFHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQSCCGHCTEQEERLLRNVISSLAQSLQELSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEADEELGVYDKGFTDDQLMLVGQNSVMVEEREKEIRQI
VQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQACVKTDDGLKQLQKAEQYQKKNRKML
VILILTVIVIVLIFILFGTKF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccactcggcgtctgaccgatgccttcttgttaatgcggaacaattcaatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgcctgagtacacgtagcaat
gctgcggagcttgatgagatggctgatgatcgaatggccttggtgtcaggaattagtctg
gatcctgaagcagccattggagtgacaaagaaactgtcccctaaatggatagaggggatt
gatgagatccagtatgaaattacacgggttcggcaaaagatgaaggatttggccgtattc
catgacaagcatatgaatcgacccacacttgatgacagtagtgaggaagagcatgccata
gaaatcactactcaggagattacacagatgtttcatcgatgccagcgagctgtgacgggc
ttgcagtcttgttgtggtcactgtaccgagcaggaggagaggctattgagaaacgtgatc
tcatccctggcacagagcctgcaggagctgtccaccaatttcaggcacacacagtccggc
taccttaagcgtatgaagaatcgtgaggagcgatcaaagcacttttttgactctggacca
ttaatggaagcggatgaagaattgggtgtatatgacaagggtttcacagacgatcagctg
atgctggttggccagaacagtgtcatggtggaagaacgagagaaggagatccgacagata
gtgcagtccatctcagatctgaatgagattttcagggacttggctggaatggtggtggaa
cagggcaccgttcttgacagaattgacttcaacgtggagcaggcttgtgtgaaaacggat
gatggacttaaacagttacaaaaggcagaacagtatcagaagaaaaacagaaagatgctg
gtcattttgattctcacagtcatagttattgttcttatttttattctttttggaacaaag
ttttaa
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