KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208858
Entry
130208858         CDS       T09868                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130208858 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130208858 (kdm5ba)
Enzymes [BR:pswi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130208858 (kdm5ba)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130208858 (kdm5ba)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130208858 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD-1st_NSD
Other DBs
NCBI-GeneID: 130208858
NCBI-ProteinID: XP_056294201
LinkDB
Position
18:17896088..17913400
AA seq 1485 aa
MTQPQLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPEWQPPFACD
VDRLKFTPRIQRLNELEAQTRVKLNFLDQIAKFWEFQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTKISVKMGFAPGKAIGSHLRAHYERILFPYNLFQNGGNQPRATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERGCFKTEPGEVCENRPNLRRRMG
TYVGKQEPVRPVVTEVKREPIKHEHPADYEETLLEKRRPSSKIDQYMCLICGKGTAEDRL
LLCDGCDDSYHIFCLMPPLHDVPKGDWRCPKCLAQECGKPPVAFGFEQASRSYTLQSFGD
MADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPLSNSY
FEVTPEDEHYLSSGWNLNNMPVLESSVLNHITADICGMKLPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGAPGYAAEHLESVMKNLAPELFESQQDLLHQLVTIMNPNTLMNN
GVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRKCVAHYRQLSRY
CVFSHDEMVCNMAYKADTMDVNLASKVQKEMTVMVHEEEQLREKINKLGVVQSRQVDYEV
LPDEERQCSKCRTTCYLSGITCACSPGKMVCLYHSRDLCSCPPSNLTLHYKFTLEELYSM
MESVKLRAESYKEWLFSVQDILENKGRRKRGLEELHSLVEQAETKAFPQIRLLDQLRTVA
SEADKVAVMAQQLLNGKRQTRYRSGGGKSQNQNDLTVEELRSFVRQFDNLPCNIRQAPLL
KDLLTRVDDFQQRSERLLSDESPSTLELQGLLDESLGLDVELPQLPLLRERLEQARWLEA
VKQASSRPESLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQWEERVLSLMEAR
PHRNMETLDAALQEVENIPAYLPNCLQLKDVVTKAKKWLHEAEALQLGGRIPVLDSLSEL
LLRAEGIPVMLEPLSRIEVLVSDVQTWKESAAKTFLLKNSPFSLLEVLCPRCDVGTGHQK
SRSKKAKEASQISKKSPTKLESLSDVERALSESKDSASAMATLAEVRQREMDILLALRAS
NESKLVPAEHCCALGVCVCQKAPSGAMMQCELCRDVFHRGCVTTPVNLEYGHAWLCPLCQ
WSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQACTEEVLKKVSKMG
RVGPGMSSHLTQGINGSFFHIEHQSVPLQGLGLELEELMVEGFLLQVTLPETEQLYKYLL
YKLVPLLSHGAPCGNNTEQDQQSQRGSPHHNKNGVSGLKKEVLNSPNKRTKRRKESSDSQ
HSEKAKKIRKKKSKKSKEKCEDTTWACSPTHPLSDPTASDSEEDYSLCAAPWCREPEGDE
VNWVQCDGSCNQWFHQVCVGLSAERAEKDDYVCISCTQPDYDRGE
NT seq 4458 nt   +upstreamnt  +downstreamnt
atgactcaaccacagctgaatgagttcattcctcctccggagtgccctgtttttgagccc
agctgggaggaatttgccgatccttttgcgtacatcaacaaaatacgacccattgcagag
aaaactggcatctgtaaggttcgaccgccgccggaatggcagccaccatttgcctgtgat
gttgacagactgaaattcacaccaaggatacaaagacttaatgagttggaggctcagacc
agagtcaagttgaacttcctggaccaaatagcaaaattctgggagtttcaaggatgcact
ctgaaaatccctcacgtggaaagaaagattttggatctttaccagctaaataaacttgtg
aatgaagaaggaggcttcgacgccgtctgtagagagcggcgctggactaagatatcggtc
aagatgggctttgctccaggcaaggctattggctctcatctgcgggcgcactatgagaga
atcctcttcccatacaacctgttccagaatggaggcaatcagcctagagccaccttgacc
aatgacacgaaagataaagagtacacccctcacgacctgccgcagcggcagtctgtccag
cctcaggagacctgcagcattgctcgccgtgcgaaacgcatgagatctgaaagaggctgt
tttaaaaccgaaccaggggaagtttgtgagaatcgtccaaatctcaggaggaggatggga
acgtatgttggcaaacaagaacctgtgagaccggtggttactgaggtgaaacgggagccc
attaaacatgagcatccagcagattacgaagaaactctattagaaaagagacgtccttcg
agtaaaatagaccagtacatgtgccttatttgtggcaaagggactgctgaggaccggctg
ctgttgtgcgacggctgtgatgacagctatcacatcttttgtctgatgcctcccctccac
gacgttcccaaaggcgactggaggtgtcccaagtgcctggctcaggaatgtggcaaacct
cctgttgcatttggctttgagcaggccagcaggagctacaccctccagtcttttggagac
atggccgattccttcaaatcagattattttaacatgccagtccatatggttcctacggag
ctagtggagaaggagttctggcgtctagtcagcaccattgaggaggacgtcactgtggag
tacggagcagacatcgcctccaaggagtttgggagtggttttcctttgagtaacagctat
tttgaagtcacccctgaggatgagcattacctgagcagcggctggaacctgaacaacatg
ccggtgctggaatcctctgtgctgaatcacattacagccgacatctgcgggatgaagtta
ccctggctgtatgtggggatgtgcttctcctccttctgctggcatattgaggaccactgg
agctactccataaactatcttcactggggggagccaaagacgtggtatggggctcctggt
tatgccgcagagcacctggagtcggtcatgaagaacctggcacctgagctatttgagtcc
cagcaagacctccttcaccagctggtcaccatcatgaatcccaacacgctgatgaacaac
ggcgtcccgatctatcgcaccaaccaatgtgccggggagtttgtcatcacttttcccaga
gcctaccacagtgggttcaaccagggcttcaactttgccgaagctgtcaacttttgcacc
atggactggatgcccatcggccgtaaatgtgtggcacactaccgccagctgagcaggtac
tgtgtcttctcacacgacgagatggtttgtaacatggcctacaaagcagacacgatggat
gtcaacctggcatccaaagtgcagaaggagatgacggtcatggtccatgaagaagaacaa
ctgagagagaagattaataaattgggtgtggtgcaatctcgacaagttgattatgaagtt
ctccctgatgaggagaggcagtgcagcaagtgtcgaaccacctgctacctgtctggcatc
acctgtgcctgcagtcctggcaagatggtgtgtctgtaccactcccgggacctctgctcc
tgtcctccgagcaaccttacactccattacaagtttacactggaggagttgtattcgatg
atggaatcagtgaagctgcgtgccgagtcctataaggaatggctctttagtgtgcaggac
atcctggagaacaaaggaagaaggaaaagaggtttggaagagcttcacagcctggtggag
caggcagaaacaaaggcgttcccacaaatccgcctcctggatcagcttcgcacagtcgcg
tcagaggctgataaagttgctgtgatggcccaacagcttctgaatggaaagaggcagacg
aggtatcgttctggaggaggaaagtctcaaaaccagaacgatctaactgttgaagagctg
aggtcttttgtccgacagtttgacaacctaccctgcaacatcagacaagctcctttacta
aaggacctgttgacccgggtggatgacttccagcagcgcagtgagcgtctcctctctgat
gagtcacccagcacgctggagctgcagggcctgctggacgagagcctgggcctggacgtg
gagctgccccagctgcccctgctgcgggagagactggagcaggcccgctggctggaggct
gtgaagcaagccagcagccggccagaaagcctctgcctggacaccatgagaaggttgata
gaccagggcgtgggtttggccccccacagctctgtggaaagagccatggctcgtctgcag
gagctgctgactgtgtctgagcagtgggaggagcgggtgctcagccttatggaagccagg
ccgcatcgcaacatggaaacgcttgatgccgctctacaagaggtagaaaacatccctgct
tatctgcccaattgtctgcagctgaaggacgtcgtcaccaaggccaagaaatggctccat
gaagccgaagcacttcagctcggtggacgtattcctgtgctggacagcctctctgagctg
ctcctcagagcagagggcatcccggtgatgctcgaaccgctcagtcggatagaggtcctc
gtcagcgacgttcagacctggaaggagagcgcggcaaaaacattcctactgaaaaactcg
cctttctctctccttgaggtgctttgtccaagatgtgatgtaggcaccgggcatcagaag
tcgagatctaaaaaagcaaaagaagcttcacagatcagtaaaaaatctccaacaaaactg
gagtctctgagtgacgtggagagagcgctctctgagagcaaggactctgcctctgccatg
gcaactctcgctgaggtccgccagagggagatggacatcttgttggcgctgcgtgcttca
aacgagtccaagcttgttcctgctgaacactgttgtgcacttggtgtttgcgtttgccaa
aaggccccttcgggtgccatgatgcagtgtgagctctgtcgagacgttttccaccgcggt
tgcgttacgacaccggtaaacctcgagtacggccacgcctggctctgcccactctgccaa
tggtcgaggaaaccccccctggacaaggtcctgcctctgttggcctcgctgcagaggatt
cgtgtgcggctgccagaaggggacgccctgcgcttcctcatcgaaaggacggtgcgatgg
cagcaccgagtccagcaggcatgcacagaggaggtgctgaagaaagtgtcaaagatgggg
agagttggacctggaatgtcttcacatctgactcagggaataaacggttcatttttccat
atagagcaccagtctgttccactccagggactcggccttgagctagaggagctgatggtg
gagggattcctcctgcaggtcactctgcctgaaactgagcagctgtacaaatacctgttg
tacaaactggtccccctgctctctcatggcgccccttgtgggaacaacacagaacaggac
caacagtcacagagagggagcccccaccacaacaagaatggcgtttcgggtctcaaaaag
gaggtgctgaacagtccgaacaaaaggaccaagcggcgcaaggaaagctctgactcgcag
cacagcgagaaggccaagaagatccgcaaaaagaagtccaagaagagcaaagagaagtgc
gaagacaccacgtgggcgtgttctccaacacacccattgtctgaccccactgcttcagat
tcagaggaggactactcgctgtgtgctgcaccatggtgcagagagccagagggcgacgag
gtaaactgggtccaatgtgacggcagctgcaatcagtggttccaccaggtctgcgtagga
ctttctgctgagcgagcagagaaagatgactatgtttgcatcagctgcacacagccagac
tatgaccgaggagaataa

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