Pseudoliparis swirei (Mariana hadal snailfish): 130208873
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Entry
130208873 CDS
T09868
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130208873
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130208873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130208873
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130208873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Claudin_2
Motif
Other DBs
NCBI-GeneID:
130208873
NCBI-ProteinID:
XP_056294235
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All DBs
Position
2:9789512..9796572
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AA seq
455 aa
AA seq
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MNTVFFIFHLVILAGAAWASYDETRLVKTLFTGYNKVVRPVHHFKDPVVVTVGLQLIQLI
SVDEVNQIVSSNVRVKQQWKDVNLQWNPMDYSGIKKIRIPSTDIWRPDLVLYNNADGDFA
IVHETKVLLEYTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNPD
SDRPDLSNFMESGEWVMKDFRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVIIP
CMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPDWVRTVFIETIPNLMFFSTMKRPGKEKQTKSS
IYGADFDISDISGNQTTSVTYQTPITKNPDVRSAIEGIKYIAETMKSDEESNNAAEEWKF
VAMVLDHVLLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtatttttcatttttcatctcgtcattctagcaggtgctgcctgggcctct
tatgatgaaacacgtctggtcaaaactctcttcactggttacaataaggtggtccggcct
gtccatcacttcaaggacccggtggtggttaccgtgggccttcagctcatccagctcatc
agtgtggatgaggtcaaccagattgtcagcagcaatgtgcgagtgaaacagcaatggaaa
gatgtgaacttgcagtggaacccgatggattacagcggcatcaaaaagatcagaattccc
tccactgacatttggcggccggatctggttctctataataatgctgacggagactttgcc
atcgttcacgagaccaaagtgctgctggagtacacaggaatgatcacatggaacccaccg
gccatcttcaagagctactgtgaaatcatcgtgctgcatttcccctttgacctccagaac
tgcagcatgaagctgggtacctggacctacgatggaaacttggtcgtcgtcaatcccgac
agtgaccgccctgatctgagtaactttatggaaagtggggagtgggtaatgaaggatttc
cggagctggaagcactgggtgtattacgcttgctgcccagatacaccttacctggacatc
acctaccacttcctcatgctgcggctcccgctgtacttcatcgtcaacgtcatcatcccc
tgcatgctcttctccttcctgactggtctcgtcttctatcttcctacagactctggtgag
aagatgactctcagcatatccgtcttgctgtctctgactgtgttcctgctggtcattgtt
gagctgatcccctctacctccagtgctgtaccgctcattgggaagtacatgctcttcacc
atggtcttcgtcattgcctccatcattatcactgtcatcgtcatcaacacccaccaccgc
tccccaagcactcacacaatgccggactgggtccgcacggtttttattgaaaccattccc
aacctcatgttcttctcaacaatgaaacgcccaggaaaagaaaagcagactaaatccagt
atttatggtgctgattttgacatctcagacatctctggcaaccagaccacttctgttacc
taccagacacccatcaccaagaaccctgacgtccgcagtgccattgaaggaatcaagtac
atcgcagaaaccatgaaatccgatgaggaatccaacaatgctgctgaagagtggaagttt
gtggccatggtgttggatcatgttctgctgtgtgtgttcatggctgtgtgtctcatcggc
acgttaggcgtgttcgcgggccgtctcattgagctgagcatgctctga
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