Pseudoliparis swirei (Mariana hadal snailfish): 130208886
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Entry
130208886 CDS
T09868
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130208886 (aff3)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130208886 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
130208886
NCBI-ProteinID:
XP_056294256
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All DBs
Position
2:complement(8316898..8328733)
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AA seq
1142 aa
AA seq
DB search
MTSHPRVAPHKSMLADDLKLSSDDDETQRATHGSASWDGQSLSAQRAHTHGRRVRHSSSD
SSGSNSTAESRSSLYSRSPSRSPDVHPDPASPANACNSKETDHPSVAQWQLDQCLKKSQR
KSSSSDQVPSQSIPGRPPSPHTQRAPSPARSWDSNREYSPSQSPIPSPQFDFSHQTCHLP
SPGYSFCPSPSPFPSTCPSPSPSPGPSPIPSPVPSVCPSPCGSPRASRSPSPIPRDPPRS
PNPGPLTLSRVRHCPEVQRTQPSLTINPHRTINRSWITPLPNTESKSKPTNGTHLQPPHQ
HRPKTRPTQDRDQSKTKTSTLLNSNQSHSHKSRPTSNFHPSSKQLSEALKHTSHFEQIQS
SRSNHSSNHKPRPTFQSSSQLSPKTSRHLGPTCRETHSGHSLQSQSTPKVAPNHNTGLSS
RSNNSLKPRAKSSEATAPTPVHVNQTITTTRKKPQSKGPEGDLRGDHLTRAEERENKRKE
DRSRTKQRGTQERKEDRRLAEEQLHRHPWIHSSTENEDEEDEGEIEKQSRREETTRVGNR
RGRDQQLRREWQPVQVKQGLLTNTERHRLEDDSHHQGRTKKGGRSEEERELQKDLSLPPS
RSPTPHRPPPSPSGSSPNSDPESEYPTPIAKVPADSTSYKRLPKRGPQGPGRPDASRPKV
AHPRGPASGHPSEEQQSEAKQKLYTLVPFGRGEQTTAPSRRGLRNLVVQIDLCLLKRVPE
RTASSTVKKPSSSSSPSSARDKQREAMKHLFVPETMSKESKRKRKLENGVSHRESKRSIP
HANDPSGHTESVPHTAERNFVTETMHNGYLEEYLDSKRPLSPLSPLSDGPQSTKPLPKGK
TSEQHHVHKSRDKNRDSALKPKMEVECVKVSRQHQPPSESWGLAGHRGAVPNNETPHHAE
YYLHEAKRMKHRADAMVDKLGKAVNYVEAVLSFMECGKAMEEGPLEAKSPYTMYSETVEL
IRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHAFKYSKVLLDYFKSSP
KVPSTPPCWSDSGKSTGGPPSSLSPNAKHLGQGAQEGSAIPSLISIPQRIHQMAANHLNI
TNSVLYSYEYWEVADNLAKENKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAK
LN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcaccctcgcgtggcacctcacaaatccatgctagctgatgacttgaagctg
agcagtgatgatgatgaaactcaaagggcaactcatggatcagcttcctgggatggacaa
agcctgtcagcacagcgagcgcacacacatggcaggcgagtgagacattccagctcggac
tcttcgggctcaaactccaccgccgagtcgcgcagcagtctttactcccggagcccgagc
cggagcccagacgttcaccctgacccggcatcgccggccaacgcgtgcaacagcaaggag
actgatcacccctctgtggcccagtggcagttggatcaatgtctaaagaagtcccagaga
aaatcttccagcagtgaccaggtgccctcccagagcattccaggacgtcctccctctccc
catacccaaagagccccatctccggccaggtcctgggacagcaatcgggaatacagccct
agccagagccctattcccagcccacaattcgatttcagccaccagacctgccacctacct
agccctggttatagcttctgccctagccccagcccattccccagcacatgcccaagtccc
agcccaagtcctgggcccagcccgatacccagtccggttccaagtgtttgtcccagtccg
tgtgggagcccgagagccagccgtagtccaagccctataccgagagaccctccaagaagc
cccaatccaggcccacttactctttctagggttcggcactgccctgaggttcagagaaca
caacctagcctaacgatcaatccccacaggacaataaataggtcatggatcaccccattg
cctaacaccgaatccaagagcaagcccaccaacggcactcatcttcagccacctcaccag
cacaggcccaagactcgacccacacaggaccgagaccaaagcaaaaccaagacttctacg
cttttaaactctaaccagagtcacagccataaatctagacccacgtctaactttcatccg
agttctaaacagctctctgaggctctcaaacacacttcacattttgagcaaatccagagt
agcagatccaaccacagctccaaccacaagcccaggcctacatttcaatctagctcacaa
cttagcccaaaaacatcaaggcacttaggtccgacttgtcgtgaaacccactctggtcat
agtcttcaatcccaatctacccctaaagttgcacctaatcacaatactgggttgagctcc
agatcaaacaatagccttaaacctagggccaagtcttcggaggctacagccccaactccg
gtgcatgttaatcagactataacaacaacacggaagaaaccccagtccaagggaccggag
ggagacctcagaggagatcatctgacccgagctgaggaaagggaaaacaagagaaaagag
gacagatctcggactaaacaacgagggacacaggagagaaaggaagacaggaggctggcg
gaggagcagctacatagacatccctggatccatagttcgacagaaaacgaggacgaggag
gacgagggagagatagagaagcagagcaggagagaggaaacaacaagggttggcaaccgg
agaggcagggaccagcaacttagacgtgaatggcaacccgtccaggtcaaacaaggactg
ctgaccaacactgagcgacaccgccttgaagacgactcacaccatcaggggaggacgaaa
aagggagggagaagtgaggaggagagagagttacagaaagatctatcacttcccccgtca
cgttccccaactcctcacagaccacccccctcgccctctggctcctctcccaattcagat
ccagaatctgaatatccgactccgatcgccaaagtccccgcagactccacctcttacaag
agactccccaagagagggccgcaaggtccgggcaggcccgacgccagcaggccgaaggtc
gcgcaccccagaggacccgcctcgggtcatccgagtgaggagcagcagagtgaggcgaag
caaaagctctacaccctggtcccattcgggcgaggtgaacaaaccacagcgccttcccgg
cgagggctgaggaacctggtggtgcagatagacctctgtctcctcaaaagggtcccggag
agaacggcgagttccactgttaaaaaaccctcctcctcttcctccccttcatctgccagg
gacaagcaaagagaggccatgaaacacctgtttgtccccgagaccatgtcgaaagaaagc
aaaaggaaacgcaagttggagaacggcgtgtcgcacagagaaagcaagcggagtattcct
catgcgaatgacccctcaggccacaccgagtccgtacctcacacagccgagcgcaacttt
gtgacggagaccatgcacaacgggtacttggaggagtacttggacagcaagaggccgctg
tcgcccctctctcctctgtccgacggccctcagtccaccaagcctctccccaaaggcaag
acgtcggagcagcaccacgtgcacaagagcagagacaagaatcgagattctgctttaaag
cccaagatggaggtggaatgtgtaaaagtgtcgagacagcaccagccaccatccgagtcc
tggggcctcgcgggtcacaggggcgccgtgcccaacaacgagactccgcaccacgctgag
tactacttacatgaagcgaagaggatgaagcaccgtgcagatgcaatggtggataagctg
gggaaggctgtgaactacgtcgaggccgtcctctccttcatggaatgtgggaaagcgatg
gaggaagggccgctcgaggccaagtctccttacaccatgtactctgagacagtggagcta
attaggtacgcaatgaggctgaagagccactccggccctggagcgaggcaggaagacaaa
cagctggcggttctgtgttttcgatgcctcgccctcctctactggcaaatgtttcgtttg
aagaaggaccacgcatttaaatactccaaagttctgctggactactttaagagttctcca
aaagtgccttctacaccaccctgttggagtgactctgggaagagcacaggaggacccccc
tcttccctctcacccaatgccaaacacctcggacagggtgcccaggagggcagcgccatc
ccctctctcataagcattccccaacgtatccaccagatggcagcaaaccacctgaacatt
accaacagtgtcctgtacagctacgagtattgggaggtggcggacaacctcgcaaaggag
aataaagagttcttcaactacttgaatactttgtctgggccattgactcttcacagcagc
atcgctcacgctgtccaatacacccgacaggctcttcagtggatacgcattagtgccaaa
cttaactaa
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