Pseudoliparis swirei (Mariana hadal snailfish): 130208936
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Entry
130208936 CDS
T09868
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208936 (bhlhe40)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
130208936 (bhlhe40)
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
130208936
NCBI-ProteinID:
XP_056294349
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All DBs
Position
18:25098247..25102459
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AA seq
398 aa
AA seq
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MERITSAQPPPSLDIADMQGIDFSMYKPRRGVKRGDDSKETYKLPHRLIEKKRRDRINEC
IAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSGVLEQQQQKLMALQNDPQIGDRG
GDAESSEEMFRSGFHLCAKEVLRYLTSQESSRDLTPSHVIGHIQKVAAEVLHHQSGPDDS
APQASEIAKKQHAGEPKRAASDGTAKNCVPVIQRTCPHAAGGELSGSDTDTDSGYGGGEH
DAKAQWSESHAKEGERRRAAASEAAAAIKLEGDEPRAKKSRADASSSSDEVLSGRVAGGP
GGYMSFGPNQPPFCLPFYLLPPAAAAAYLPMLEKHWYHGGLPLMYPGMGCSAAGVTPETT
AMSPGAGSPASYQNPADSPALHRALKQLPPPVNPETKD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattaccagcgcgcaaccaccgccgtcactggatatagccgacatgcaagga
atcgatttctccatgtataaacccaggaggggcgtgaagcgcggggatgacagcaaggag
acttacaagttgccccaccggctgatcgaaaagaaaaggcgcgacaggatcaacgagtgc
atcgcccagctgaaggatctgttgccggagcacctcaagctcacgacgctgggtcatttg
gagaaagccgtggtgctggagctcacgctgaagcacgtgaaggccctgagcggcgtcctg
gagcagcagcagcagaagctcatggcgctgcagaacgacccgcagatcggcgatcgcggc
ggcgacgcggagagcagcgaggagatgttccgctccggcttccacctgtgtgcgaaggag
gtcctccgctacctgaccagccaagagagcagcagggacctgaccccctcccacgtcatc
ggccacatccaaaaggtcgcggcggaggtcctgcaccaccagagcgggccggacgactcc
gcccctcaagcgtcggagatcgccaagaagcagcacgccggcgagcccaagcgggcggcg
tccgacggcaccgccaagaactgcgtccccgtcattcaaaggacttgcccccacgcggcg
gggggggagctgagcggcagcgacacggacaccgacagcggctacggcggcggcgagcac
gacgccaaagcccagtggtcagagagccacgccaaggagggggagcgcaggcgcgccgcc
gcgtccgaggcggccgccgccatcaagctggagggcgacgagccgcgggccaagaagtcg
agggccgacgcctcctcctcctcggacgaggttctctccggccgcgtggcgggaggcccc
ggcggctacatgagcttcggccccaaccagccgccgttctgcctccccttctacctcctc
ccccccgcggcggcggcggcctacctgcccatgctggagaagcactggtaccacgggggc
ctgccgctcatgtacccgggcatgggatgctccgcagcgggcgtgaccccggagacgacg
gccatgtccccgggggcggggtctccggcgtcctaccagaaccccgcggactcccccgcc
ctgcacagagctctgaagcagctcccccccccggtgaacccggaaaccaaagactga
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