KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208937
Entry
130208937         CDS       T09868                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013  Nucleocytoplasmic transport
pswi04141  Protein processing in endoplasmic reticulum
pswi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130208937 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130208937 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130208937 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130208937 (sec13)
   04131 Membrane trafficking [BR:pswi04131]
    130208937 (sec13)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130208937 (sec13)
Membrane trafficking [BR:pswi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130208937 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130208937 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130208937 (sec13)
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 130208937
NCBI-ProteinID: XP_056294350
LinkDB
Position
18:complement(1235296..1248605)
AA seq 320 aa
MVSVINTVDTSHEDMVHDAQMDYYGTRLATCSSDRTVKVFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNVLASCSYDRKVIVWKEENGSWDKMFEYCGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVAPGSLIDQPLGQKPICVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSSITDTQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgtgatcaacacggtggacacgtcccacgaggacatggtgcacgacgctcag
atggattactacggcacgcggctcgccacctgctcctccgaccgcaccgtgaaggtcttc
gacgtcaggaacgggggacagatcctggtggccgacctccgaggccacgagggccccgtg
tggcaggtggcgtgggctcacccgatgttcggcaacgttctggcgtcctgctcctacgac
cgcaaagtgatcgtgtggaaggaggagaacggctcgtgggacaagatgttcgagtactgc
ggccacgagtcgtcggtgaactccgtctgctggggtccgtacgacttcgggctgatcctg
gcgtgcggcagctctgacggcgccatctccctcctcacgttcaccggcgaccagcagtgg
gacgtcaagaagatcagcaacgcacacacgatcggctgcaacgcggtgagctgggcgccg
gccgtggcgcccggcagcctcatcgaccagccgttgggtcagaagccgatctgcgtgaag
cgctttgtgtccggaggctgtgacaacctggtgaagctgtggaaagaggaggacggccag
tggaaggaggaccagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccgtcaatcggcctccccaccagcaccatcgccagctgctctcaggacggacgcgtgttc
atctggacgtgtgacgacccggcgggaaacacctggacggccaaactgctccacaagttc
aacgacgtggtctggcacgtcagctggtccatcacggggaacatcctggccgtgtccgga
ggagacaacaaggtgactctgtggaaggagtccatggacggccagtgggcgtgtatcagt
gacgtgagcaaaggacagggcgccgtgtccagcataacggacacgcagcagagcgagcag
tga

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