Pseudoliparis swirei (Mariana hadal snailfish): 130208937
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Entry
130208937 CDS
T09868
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi04141
Protein processing in endoplasmic reticulum
pswi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130208937 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130208937 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130208937 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130208937 (sec13)
04131 Membrane trafficking [BR:
pswi04131
]
130208937 (sec13)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130208937 (sec13)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130208937 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130208937 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130208937 (sec13)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
130208937
NCBI-ProteinID:
XP_056294350
LinkDB
All DBs
Position
18:complement(1235296..1248605)
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMVHDAQMDYYGTRLATCSSDRTVKVFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNVLASCSYDRKVIVWKEENGSWDKMFEYCGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKISNAHTIGCNAVSWAPAVAPGSLIDQPLGQKPICVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSSITDTQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtgatcaacacggtggacacgtcccacgaggacatggtgcacgacgctcag
atggattactacggcacgcggctcgccacctgctcctccgaccgcaccgtgaaggtcttc
gacgtcaggaacgggggacagatcctggtggccgacctccgaggccacgagggccccgtg
tggcaggtggcgtgggctcacccgatgttcggcaacgttctggcgtcctgctcctacgac
cgcaaagtgatcgtgtggaaggaggagaacggctcgtgggacaagatgttcgagtactgc
ggccacgagtcgtcggtgaactccgtctgctggggtccgtacgacttcgggctgatcctg
gcgtgcggcagctctgacggcgccatctccctcctcacgttcaccggcgaccagcagtgg
gacgtcaagaagatcagcaacgcacacacgatcggctgcaacgcggtgagctgggcgccg
gccgtggcgcccggcagcctcatcgaccagccgttgggtcagaagccgatctgcgtgaag
cgctttgtgtccggaggctgtgacaacctggtgaagctgtggaaagaggaggacggccag
tggaaggaggaccagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccgtcaatcggcctccccaccagcaccatcgccagctgctctcaggacggacgcgtgttc
atctggacgtgtgacgacccggcgggaaacacctggacggccaaactgctccacaagttc
aacgacgtggtctggcacgtcagctggtccatcacggggaacatcctggccgtgtccgga
ggagacaacaaggtgactctgtggaaggagtccatggacggccagtgggcgtgtatcagt
gacgtgagcaaaggacagggcgccgtgtccagcataacggacacgcagcagagcgagcag
tga
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