Pseudoliparis swirei (Mariana hadal snailfish): 130208945
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Entry
130208945 CDS
T09868
Symbol
iqsec1b
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130208945 (iqsec1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130208945 (iqsec1b)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130208945 (iqsec1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
Shugoshin_N
PH_19
RHG20_PH
bZIP_2
Motif
Other DBs
NCBI-GeneID:
130208945
NCBI-ProteinID:
XP_056294372
LinkDB
All DBs
Position
18:22012239..22220499
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AA seq
1232 aa
AA seq
DB search
MDSQRGFYEMENPAENPSKAVEYLAELNKIIETQQGLLEKQRVRIEELELQVTDLCKENV
CLKDQHQRHLATCRLQQGNHSALVAIKENAAQEKSESGCSRSVRRHTSLPVEVSEIPLNL
IDPSCRRSYPCRKWKSASFGVEGDAAGSEVGASLDPGGGYSCIPVTHSGGLGPDHLDNQL
YGHILLPGHLRPRRPKLPHSQSILRKQAEEEAIKRSRSLSESYELSADLQDKQVEMLERK
YGGRFITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKV
HSSYFEGKQVSLTDDGTKMGALVQSEHGGEMGLQAKTPTTQSDFTDAITELEDAFSRQVK
SLAESIDDALNCRGQHGDDNQSEPGRSHHDMDREVSCQVKPAHGASEHRKLDEMTASYSD
VTLYIDEEELSPPLPPSQSVDRTSSTESDLRQRSLNSSQDYWSLAHKDEKGDTDTSCRST
PSLEYQEQRLRVDHLPLLTIEPPSDSSVELSDRSDRSSSKRPNASDRTLGKQQNSPKHIG
HSLPPRGPSRDEDAPRHRPRQLEAHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTI
NCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDLIRKRHYRIGLNLFNKKPEKGI
QYLIERNFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAME
LDEALRKFQAHIRVQGEAQKVERLIEAYSQRYCICNPGVVRQFRNPDTIFILAFAIILLN
TDMYSPNVKLEKKMKLEDFVKNLRGVDDGEDIPREMLVGIYERIRKRELKTNEDHVSQVQ
KVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFND
LLVVTKILQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGVRLTSAITGADIKVLINFN
APNPQDRKKFTDDLRESIAEIQEMEKYRIESELEKQKGVVRPSMAQKKETGNGNLSRGSL
DDSYATGEGLKRSALSSSLRDLSDAGKRGRRSSAGSLDSNMEGSIISSPHMRRRTPSARD
CPSRHSGQSLPNCSSLLGTLFGTRRVKSPSPTPQALHPTLISHTPHPANLHHTARSETDA
PASAHHGQFCPVTQNPPPYHHHHHYHPPAHLQHPPHQYHPPASHGQQPAYPPHGHGGHPP
HPAHGPHHHGPPPPSQAPSSTKPKHSGISTVV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcaacggggcttttacgagatggagaacccggcggagaaccccagcaaggcg
gtggagtacctcgcggagctgaacaagatcatcgagacgcagcaggggctgctggagaag
cagcgggtccggatcgaggagctggagctccaggtgacggacctctgcaaggagaacgtg
tgcctgaaggaccagcaccagcggcacctggccacctgcagacttcagcagggcaaccac
tctgccctggtcgccatcaaggagaacgcggcgcaggaaaaatctgaaagcggatgttca
agaagtgtcaggcgacacacctcattgcccgtagaagtctcagagatccctctaaacctt
attgacccatcgtgtcgaagaagttacccctgtcgcaaatggaagtctgcatctttcggt
gtggaaggtgatgctgcaggcagcgaggtgggcgcctccctggaccccggcggtggctac
agctgcatcccagtgacccacagcggcgggctgggccccgaccacctggacaaccagctc
tacggacacatcctgctgcccggccacttgcggccccgccgacccaagctcccacactcc
cagtccatcctccgcaagcaggcagaggaggaggccatcaagcgctcccgctcgctgtcg
gagagctatgagctctcagcggacctgcaggacaagcaggtggagatgctagagcgtaaa
tatggtggccgtttcataacccggcatgcagcccgcaccatccagacagccttccgccag
taccagatgaacaagaactttgagcgtctcagaagttctatgtctgagaaccgtatgtcc
aggcggatcgtcctatccaatatgagaatgcagttttcctttgaaggacctgaaaaagtc
cacagctcctacttcgagggaaagcaggtctcactaactgatgacggcaccaaaatgggt
gccctcgtgcagtcggagcacggcggggagatgggcctgcaggccaagacccccaccacg
cagagcgacttcacagacgctatcacagaactagaagatgccttctccaggcaggtcaaa
tctctagctgagtccatcgacgatgcgctaaactgtcgcggtcagcatggtgacgacaac
cagtcggagccggggagaagccaccacgacatggacagggaggtcagctgccaggtgaaa
cccgcccacggggcttcggaacaccgcaaactggatgagatgacggcgtcttacagtgac
gttaccctttacatcgatgaagaagaactgtcgccaccactgcccccgtctcaatctgtg
gaccgcacctccagcaccgaatctgacttgcgtcagcgttccctcaactcttcccaggac
tactggtcactggctcataaggatgaaaagggggacacggacaccagctgccgaagtaca
ccatctctggagtaccaagagcagcgcttgcgagtggaccacctccccttactgaccatt
gagcctccgagcgacagctcggtggagctcagtgatcgctctgaccgcagctcctcgaag
agaccgaacgcctccgaccggactctcggcaaacagcagaacagccccaagcacatcggc
cacagtctgcccccccgagggccttccagagacgaggacgccccgcgccatcggccgcgg
caactggaggcccacctggccatcaacggcaccgccaaccggcagagcaagtcggagtcc
gattactccgacggcgacaacgacagcatcaacagcacgtccaactccaacgacaccatc
aactgcagctccgagtcctcgtccagggacagcctgagggagcagacgctcagcaagcag
acgtaccacaaagagactcgcaacagctgggactcgcctgcgttcagtaacgacctcatt
cgcaagaggcactaccgcatcggcctcaatctcttcaacaagaaaccagaaaaaggcatc
cagtatctgatagagcgaaactttgttccggacactccagtgggtgtggcccacttcctg
ctccagaggaaaggcttgagtcggcagatgatcggcgagttcttgggcaacagacagaaa
caattcaaccgagatgtcctcgactgtgtggtggatgaaatggacttctcggctatggag
ctggacgaagcactcaggaaattccaggcacacatcagagtgcaaggagaagcacagaag
gtggagcgactcatagaggcctatagccaacgctactgcatctgcaaccccggcgtggtg
cggcagttcaggaaccccgacaccatcttcatcctggccttcgccatcatcctcctcaac
acggacatgtacagccccaacgtcaagctggagaagaagatgaagctggaggactttgtc
aagaatcttcgaggagtggacgacggggaagacatcccccgagagatgctggtggggatt
tatgagcggatccgcaagcgggagctcaagaccaacgaagaccacgtgtcgcaggttcag
aaagtggaaaaactcatcgtaggaaagaagccgatcggctcgctacaccatggtctgggc
tgtgtgctctctttaccccaccggagactggtctgctactgcagactttttgaagtgccc
gaccccaacaaacctcaaaagttgggcctccaccaaagggagatcttcctctttaacgac
ctgctggtggtcaccaaaattttacaaaagaagaagaactctgtgacgtacagctttcgg
cagtccttctcgctttacggcatgcaagtgctgctctttgagaaccagtattatcccaat
ggagtccgtctgacctcagccattaccggagctgacatcaaagtcctcataaacttcaac
gcgcccaatcctcaggaccgcaaaaagttcactgacgatttgcgagaatctatcgctgag
atccaagagatggagaagtaccggatagaatctgagctggagaagcagaagggcgtggtg
aggcccagcatggcccagaagaaggaaacgggcaacggcaacctgagccgagggagcctc
gacgacagctacgccaccggcgagggtttgaagaggagcgccctcagcagctccctacgt
gacctctcggatgcaggcaagcgtgggagacgcagcagtgcgggatcactagacagcaat
atggaagggtccatcattagcagcccccacatgcgccggaggaccccctcggcccgagac
tgcccgtcccgccacagcggccagtcgctgcccaactgctcctcgctgctcggaacgctg
ttcggcacccggcgggtgaagtcccccagccccaccccacaggcgctgcaccccaccctc
atctctcacacccctcaccccgccaacctgcaccacacggcccggtcggagactgacgcg
ccggcctccgcccaccacggccagttctgccccgtgacccagaaccccccgccttaccac
caccaccaccactaccacccgccggcccacctgcagcacccgccgcaccagtaccacccg
ccggcgtctcacggccagcagccggcctacccgccccacggccacgggggtcatccgccg
caccccgcccacgggccccaccaccacggcccgccgccgccctctcaggctcccagcagc
accaagcccaaacacagcggcatcagcacggtggtctga
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