Pseudoliparis swirei (Mariana hadal snailfish): 130209017
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Entry
130209017 CDS
T09868
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209017 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130209017 (irf6)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130209017 (irf6)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130209017 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130209017
NCBI-ProteinID:
XP_056294491
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Position
18:complement(15367803..15373754)
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AA seq
487 aa
AA seq
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MSVTPRRVRLKPWLVAQVDSSRYPDLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGIDEPDPAKWKAQLRCALNKSREFNLVFDGTKEVPMNPLKIYDVCDIPPPS
INQASSDAGSWTPHEEDGGDEDIPDTPESLPPYPSNGTSPSPLIMWSPSSESQHSSCPPS
NEAWPKEESVKIWPKEEPVDVEMHPTPMLPPAPLPDHSMQPPPLPDAFFASPEMWISSLP
MTDLEVQFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPTTEHI
TNDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQRK
IKLFCLESYLSGVIAHQRGQIPSPPHFEINLCFGEEWPDGRPKERKLIMVQIIPVVARML
SEMFSGENTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQNHQGQDGWTLPPGPGLNI
VQTLQAQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacccctcgccgtgtgcgcctgaagccctggctggtcgcgcaggtggacagc
agccgatacccagacctggtgtggatcgaccgcgaggccatgcgcttcaggatcccgtgg
aaacacgccacgcgacacacgccgcagcacgaggacgaggacaccatattcaaggcgtgg
gctgtggagaccgggaagtttcaagagggaattgatgaacctgatcctgcaaagtggaaa
gctcagcttagatgtgccctgaacaaaagcagagaattcaacctggtcttcgatggcacc
aaagaggttcccatgaatcctttgaagatatatgatgtctgcgacatcccaccgccctct
ataaaccaagcctcctcagacgctggttcttggactccacatgaggaagatggtggtgat
gaagatattccagatacaccagagtctctccctccatacccatccaatggcactagtccc
tctcctcttattatgtggtctcctagctcagagtcgcagcattccagttgtcccccttca
aatgaggcctggcccaaagaggagtctgttaaaatctggcctaaagaggagcctgtggat
gtggagatgcacccaactcccatgttgcctccggctcccctgcccgatcactcgatgcaa
ccccctcctctacccgacgccttttttgcctctccagaaatgtggatcagttccctcccg
atgacggacctggaggtgcagtttctgtacagagggaaggagatgtgccccacagccaac
gtcagtaacccgcagggctgccggctgttctacggagacctgggccccatggtcaaccag
gaggagctattcgggccggtgaacttggagcagctacgctttccgaccaccgagcacatt
accaatgacaagcaaagggttttcactaaccgcctgctggatgtgatggacagaggcctc
atcctggaggtcagcggtcacgatatctacgcagtgcgtctctgccagtgcaaagtgtac
tggtctggcccctgtgctccaaatccagcggctccaaatcttatagagcgtcagaggaag
atcaaactcttttgcctggagtcatatctcagtggagtgatagcccaccagcgtggccag
ataccaagccctcctcactttgaaattaacctgtgttttggagaggagtggcctgatggg
aggcccaaagagaggaaactcatcatggttcagatcattccagtggtggcccggatgctg
agcgagatgttttctggagaaaacacgcggtccttcgacagcggcagcgttcgcctgcag
atctcaattccagatatcaaagacaacatagtgacccacctcaagcagctgtactgcctg
ctgcagaaccaccagggccaggatggctggacgttgccccccggcccaggcttgaacatc
gtccagactctgcaggcccagtga
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