Pseudoliparis swirei (Mariana hadal snailfish): 130209021
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Entry
130209021 CDS
T09868
Symbol
cacna2d3
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130209021 (cacna2d3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130209021 (cacna2d3)
04261 Adrenergic signaling in cardiomyocytes
130209021 (cacna2d3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130209021 (cacna2d3)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130209021 (cacna2d3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA
dCache_1
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
130209021
NCBI-ProteinID:
XP_056294496
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Position
18:14687267..14725855
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AA seq
1159 aa
AA seq
DB search
MFGNWRIVLSRTCSTSSFLLIWILVGLRAVEVAGSQQGIPLSVVKLWASAFGGEIKSISA
KYSGSQLLQKELWTITAPRPGTNSSSEPSASAKGSRMNPKNAACPGAWEGGGTRGSPRKY
GESFQTAYRKRLLGSATCSEKYKELEKSVKVEEIDGVKLVKNLAVKMEEVFRKKADATRR
LVEAAEEAHHQHEDNPELQYEYFNAVLINEVDEEGNNVELGGEFLLEPNNHFNNLSVNLS
LSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQYPGVK
WYPDKHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGE
DDFFNIIAYNQEVHYVEPCLNGTLVRADRTNKDHFREHLDRLFAKGIGLLGDALAEAFTI
LSNFNQTGHGSLCSQAIMLVTDGATAMYDDVFEKYNWPERKVRIFSYLIGRESAFADNLK
WMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDTPLSQAHKLK
DKAGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYAFAIT
NNGYILSHPDLRPLYQDGQKRRKPNYSSVDLSEVEWEDKDDVLRNAMVNRRTGTFSMEVK
RTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQPDVA
LADEWTYCNTEEQHEHRHLTQIQAIKLFMTGRRTHLKCDRELIQEVLFDAVVTAPLEAYW
TGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEDKEGVFNADHFPL
WYKRAAEQVTGTFLYSVPFGTAFDNKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQR
KFWTACRQCTALDGKCSISCDHADINCYLIDNNAFILVTEEQSQTGLFFGEVEGAVMNKL
LQMGSFKRIPLYDYQAFCRDYARSSDSARTLSDPFTVVKWLLAELVIFLLEFNLYSWWNV
DLSVKAQRFRHKNAMVPCDTEYPAFVSERTIKETTGNIDCEDCIRSFVIQQIPSSNLFMV
VVDNKCDCSSSPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSATR
LSSPLTAALLPLIAATVSR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaactggagaattgtgttgtcgcgcacgtgcagcaccagcagcttccttttg
atttggatcctcgtcggcttgagagcggtggaggtggcggggtcccagcaagggatccct
ctgtcagtcgtaaagctttgggcttcagcatttggtggagaaattaaatccatctctgca
aaatattctggatcccaactactgcaaaaggagctgtggaccatcacagcaccgcgtccg
gggaccaactccagttctgagcccagtgcctcggccaagggcagcaggatgaatcctaaa
aacgctgcatgtcctggagcgtgggaaggcggaggaaccagaggaagtccacgcaaatat
ggggagagctttcaaactgcatatagaaagcggctgctgggttcagctacttgctctgag
aaatataaagaacttgaaaagtcagtcaaagtggaagaaattgatggtgtgaaactggtc
aaaaacttggcagtgaagatggaggaagtgttccggaaaaaagcagatgccaccaggcgg
ctggtggaggcagcggaagaagcgcaccatcagcacgaggataatccggagctgcagtat
gaatactttaacgccgtactgatcaatgaagtggacgaggagggcaataacgtagagctc
ggaggagagtttcttctggagcccaacaaccatttcaataacctgtcagtcaacctgagc
ctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatcctgacatagtgaacgga
gtttactggtccgaagctttgaataaagtatttgtagataattttgagagagatccaaca
ctaatctggcagtactttgggagcgctaaaggtttcttcaggcagtaccctggagtaaag
tggtatccggataaacatggcgtcattggctttgactgtagaaacaggaagtggtacatc
caggcagcaacgtctccgaaggacgttgttatcttagtcgatgttagtggaagcatgaaa
ggactgaggctgaccatcgccaggcagactgtctcctccatattagacacacttggagaa
gatgacttcttcaacatcattgcatacaatcaggaggttcactacgtggagccttgtttg
aatggcacactggtccgagccgacagaaccaataaagaccatttccgggaacatctggac
aggctgtttgccaaagggatcgggctgttgggcgacgctctggccgaagccttcacgatc
ctgagtaattttaatcaaactggacatggcagtttgtgcagccaggccataatgcttgtg
actgacggggcaactgcaatgtatgacgatgtttttgagaagtacaattggccagaaaga
aaggtgcggatattctcatacctgattggacgagagtctgcatttgctgataacctcaaa
tggatggcgtgtgccaacaaaggttacttcagtcagatctccaccttagcagatgttcag
gagaacgtgatgaggtatcttcacgtcatgagccgcccaaaggttattgaccacgagcac
gacaccgtttggactgaagcttacgtggacacccctctttcccaggctcataagttgaag
gacaaagccggccccagtctgatgacgaccgttgccatgcctgtcttcagcacaaagaat
gaaacgaagaaccagggtattctgttgggagtcgtgggaacagacatccctctgcaggag
ctgatgaagctcatccctaaacatatgttaggaatccatgggtacgcatttgcgatcaca
aacaatggctacattctgagtcatccggacctcagacctttgtatcaggatggtcagaag
aggagaaagcccaactacagcagcgtggatctctctgaggtggaatgggaagacaaagat
gatgttctacgcaacgcaatggtgaacaggagaacagggacgttctccatggaggtgaag
aggacggtggatagagggaggcgtgtgctgaagatgcacaacgactattactacacggat
atcaaaggaaccccattcagtgtcggagtggctctttccagaggtcatggaaagtacttc
ttcagaggaaatgtatccgttgaagccgggctccgtgatctggaacagccagatgtcgcc
ctggcagacgaatggacttactgcaacacagaggagcagcatgagcaccgtcatctgacc
cagattcaagccatcaagctcttcatgacgggccgcagaacccacctcaaatgtgacaga
gagctcatccaggaggtgttatttgatgctgtggtcaccgctccactggaggcctactgg
accggactggccctcaacaagtcagagaactcagacaagggagtggagatcgccttcctg
ggcacacgcaccggcctgtcgaggaccaacctgtttgttcccgccgatcagctctccaat
caagatttcctgacagccgaggacaaggagggtgtgtttaatgctgatcacttccctctg
tggtacaagcgagctgcagagcaggtcaccggcacgtttctctactctgtccccttcggc
acagctttcgataataagagtgtggttttggccagtacagcaattcaactcctcgacgac
agaaagtctccaatcgttgcagctgtagggatccagatgaagcttgagttctttcagagg
aagttctggacggcctgcagacagtgcacagctctggatggaaaatgtagcattagctgc
gatcacgcggacattaactgttatcttattgacaacaatgccttcattcttgtcacagag
gagcaatctcagactgggctcttctttggagaggtggagggtgctgtaatgaacaaactt
ctccaaatggggtccttcaaaaggatcccgctgtatgattaccaggccttctgcagagac
tacgctcggagcagcgacagtgcacgcactctatcagatccttttactgttgttaagtgg
ctcctggctgaacttgtcatttttctgctagaatttaacctgtacagctggtggaacgtg
gatctttcagttaaagctcagcgatttcggcataaaaacgcgatggtgccgtgtgacaca
gaataccctgcctttgtctctgaacgcaccatcaaggaaacgaccggcaacattgactgt
gaagactgtatcaggtcttttgtcatacagcagattcccagcagcaacctcttcatggtt
gttgtggacaataagtgtgactgcagcagttctccagtaaccatggatcccatcgagatc
atgtacaacgagtcactaaaatgtgacagactgaagtttcagaaggacagaaagaagcct
gaatcgtgtcatcctttccaccctgaggaaaatgccatggagtgtggttcagcaacacgc
ctctccagtcctctcacagcagctctgctccctctgatagcagcgaccgtcagcaggtga
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