Pseudoliparis swirei (Mariana hadal snailfish): 130209112
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Entry
130209112 CDS
T09868
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130209112 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130209112 (gtf2e1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
130209112 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
130209112 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
130209112
NCBI-ProteinID:
XP_056294638
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All DBs
Position
2:15416304..15423673
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AA seq
441 aa
AA seq
DB search
MIAPEVLTEVPAALKRLAKQVVRGFYGVDHALSLDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETALDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCRTEVEEDASVCTDGRTLVARFNE
QIEPIYALLRETEDVNLSQELLEPEPSEIPALKQSRDRAAAAGGNLGPHREAWSNKGSSY
GDMYTQNVVISMEEQEEQLKQAKEGKAPKQRPVWLTQSTVQGAYSEPDVLKNSEDVVPMA
QDGVAGLGIGQTDENEEVMRALLIHEKRGAAAGTGAGGASIATRPSKTANNSDSDSDTSE
SDDASPSAPPPATAAQHRAAQEEEDDDEFEEVGDEPMVMVGGKQFSYREVSQKPELVEQM
SAQEKEAYIEMGQHLFQDMYF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaccggaggtgctgaccgaggttcctgcagcgcttaagcggctcgccaagcag
gtcgtacggggcttctatggagtggaccatgccttgtccctggatgtgctcattcgcaac
ccatgtgtgcgcgaggaggacatgctggagctgctcaagtttgatcgcaaacaactgcgc
tcagtactcaacaccctgaaggcagacaagtttgtgaagtgtcgcatgagagtggaaacg
gcccttgatggcaagacaactcggcacaactattacttcatcaactacagggtcttggtc
aacgtggtgaagtataaattggatcatatgcgccgccgcattgagacagatgagcgagat
tccaccaaccgcgcctccttccggtgcccctgctgcttctccaccttcacggatttagag
gccaatcagctgtttgacccaatgacaggtacgtttcgctgcaccttctgccggacggag
gtagaggaagacgcgtccgtctgtactgacggcaggacgctcgtggcgcgcttcaatgag
cagatcgagcccatctacgcgctgctccgtgagaccgaagatgtgaacctgtctcaggag
ctgctggagcccgagccttctgagatccctgccctcaaacagagccgtgatcgtgccgca
gcagccggaggaaacttaggcccgcaccgcgaggcctggtccaacaaaggctcgtcttac
ggggacatgtacacccagaatgtggtgatcagcatggaggagcaggaggagcagctgaag
caggccaaggagggcaaggccccgaagcagaggcccgtctggttgacccagagcaccgtg
cagggcgcttacagcgagcccgacgtcctcaagaacagcgaagacgtcgtgcccatggcc
caggatggagtagcgggtctcggaattggtcagacggatgaaaacgaggaagtgatgcgc
gccctgctcatccacgagaagaggggcgcggcggcgggaacaggtgcaggcggagcgagc
atcgcgacccggccctcgaagacggcgaataacagcgactctgacagcgacaccagcgaa
tcggatgacgcctccccctcagctcctccccccgccacagctgctcagcatcgagcggca
caggaggaagaggacgacgacgagtttgaggaggtcggggatgagccgatggtgatggtg
ggaggcaagcagttctcgtaccgagaggtcagccagaagcccgagctcgtggagcaaatg
tctgcgcaggagaaggaggcctacattgaaatgggacaacacctcttccaggacatgtac
ttctga
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