Pseudoliparis swirei (Mariana hadal snailfish): 130209207
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Entry
130209207 CDS
T09868
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130209207 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209207 (atrx)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130209207 (atrx)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130209207 (atrx)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130209207 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130209207
NCBI-ProteinID:
XP_056294686
LinkDB
All DBs
Position
19:complement(12026351..12063993)
Genome browser
AA seq
2133 aa
AA seq
DB search
MSLASSESHRDQMSEKAEEPGSSTETMKPSSRNKRKPTTVSKHTGPKESDASAESENEDS
SSDNPSDNNTSSVSKGTLVIRPAGNDNKGAMKLRVDFKHKHTEDALQKKANCTACGKQVN
QFQRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNAF
CKKCILRNLGRKELSVITDENSKWHCYVCRAEPLQDLVSKCHSIMEKQELKDRKPDKSEE
CESKRHKNKTVREHKTIVNGKEHTEGSGTMTFSYKKLQVPKELIKKAKKLVETTTGLNNT
FIQFIQQAAEEQGDKSIRYRHLKAFRAVLADLKKAHSALEAALGPEFKSMELQNGDEGQH
IARKSTCVVSTVENDMDNMTDAEEEAGDDQVEEEDFTEVKAEDLAEEEKAEDVAEKASDL
VEEEDDDDDLAADEADDDPAEEEANNGLEEEEADKDLEEAATDVAMKETNVGVEEVNDMA
AKDPDNPEAEEDEKAGPATAGEAGHTAVEESDVGQHNEQEVSDDPKMKANQTETNRTKKR
IKAEACDDGLVSAGEMSLDQDIMSVPPSVPEELFQMVESLADSTMLSQSDTNLVIDAVKK
SSGNSKDSQPTQPKVKNLIVKLTPVPVVTTRGSRSSVSKNREKAGETKKKGVEDREKEKD
DAAKAAGDGTASPPPSRRSSRLKTTPLRKQAENKGKEESSESDEDRKSKSKSFKKSSKEN
KENAKETNVSEKKTMDSDSDEIPNVLLEKAAAGRSTDEEQESTSAKKCLFKQKNTSTQDT
DKASKRKRKSESSDSDLGIKSKKMSKKKTKQTGSDSTNSDSDQEKESKSKAATVKRRSSR
VKKQDEAKEEEKSSPERKAAKRKRSYEAKRKGRSLKSASKLQSSSSSEEEQHAEGDSAED
SDEQKIKPIVEDGVVGGSGPVHQSSGDEEDDNAGVSQDCEDDDDDDPENRIAKKMLLAQI
KSNYSSGAESSSDNGEDEDGKSSRKVKKDDGDDDDDGDEEQHDEDSEDSSSEVEVKKHGG
RHKLLRHKLSLSEAESGEEKAASKGKKGSKKKSGKKVHSDASSDSDSDFEKSESSEESGL
SEELTESENEGKSRKTRASKKKDEAKRRSYKKKQQQKKKKRRRIKVQDSSSSNESGKEGD
DDDEDNKGRKKIRKILKDDKLRTETRDALKEEEDRRKRIAEREALREKLREVLLLKESPH
VISPCPITTKLVLDEHEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESLKKIKKSS
GSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDFTTALVVCPLNTVLNWLNEFEKWQVGLK
DDESLEVVELATVKRPQERAYALQRWQDTGGVIIIGYEMYRNLTQGRNIKSKKLKEIFQK
TLVDPGPDMVICDEGHILKNEASAVSRAMNSIRTRRRIVLTGTPLQNNLVEYHCMVNFIK
ENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIMKKRAHILYEMLAGCVQRKDYSALTKF
LPPKHEYVLSVRVTPIQCKLYRYYLEHFTGVGNAMEGGRGRGGTKLFQDFQVLSRIWTHP
WCLHLDYVSKENRGFFDEDSMDEFIASETEESSMSMTSEDEKAKKKKKLGRGKKRGSDDS
DSDEVEVIKEWNTCTRGKNGESRSRPQLVEEPQAPSSPGHPGHDWHKTFVSDTDGEVLEH
SGKLMLLFEILRMAEDVDEKVLVFSQSLISLDLIEDFLELATKAKDDDEIVSPYKGEGKW
FRNIDYYRLDGSTNATTRKKWAEEFNDTSNIRGRLFLISTRAGSLGINLVAANRVIIFDA
SWNPSYDVQSIFRVYRFGQIRTVFVYRFLAQGTMEAKIYDRQVTKQSLAFRVVDQQQIER
HFTGVELAELYTFEPEMLDDPTTKKSKKATPVLPKDPFLAEMLQNNKDQIVCYHEHDSLL
DHKEEEALSEEDRKAAWTEYEAEKKGVFMRDNYQTAYPQMDTNNSNYFSFNMAALASMTN
QQLEDLINQGRQKVIEATNALKAVARESLEDTIARLWKENPDLTETQVQSMALAHQVTLE
TEIKRRESVYRDVLTRQQTLMMYVQKMVTNRKVQEQQMAMANQASYLNQLAMQNGMMGGG
GLSQMDLVGLYQQLHGLGSHQGMGKNPGPSKGL
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatcgcacagagaccaaatgtcagaaaaggcagaggagcct
ggaagctcaacagaaactatgaagccctcttctcgcaacaagaggaagcccactactgta
tctaagcacactggaccgaaagaatctgacgcctcagctgagagtgaaaatgaagattcc
tcttctgacaatccttcagataataatacaagcagtgtatcgaaaggcactttagtcata
aggccagctgggaatgataataaaggtgccatgaagctcagagtagatttcaaacacaaa
catacagaagatgccctgcagaagaaggcaaactgcactgcctgtggtaaacaagtaaac
cagtttcagcgcaactctgtgtacgagcatcctgcactcaaagttctcatttgcaagtca
tgctacaagtattacacaagtgatgacatcaacagggactctgatgggatggatgagcag
tgcaggtggtgtgctgaaggtggaaagctcatctgctgtgactattgcaacaatgccttc
tgcaagaagtgcatcctgcgcaatttgggcagaaaggagctgtctgtcattactgatgag
aactcaaaatggcactgctatgtctgcagggcagagcccctccaggatctggtctccaaa
tgccacagcatcatggaaaaacaagaactcaaggatcgaaaaccagacaaaagcgaggaa
tgtgagagcaagagacacaagaacaaaacagtcagagagcacaaaaccattgtcaatggg
aaagaacacaccgaaggctcagggaccatgacattctcctacaaaaaactgcaggtgccc
aaagaacttataaagaaagcaaaaaagcttgttgaaactacaactggtttgaacaataca
ttcatccagttcatccaacaggcagctgaggagcaaggagataagtccatcaggtatcgg
catttgaaagccttcagggccgtgcttgctgatttgaaaaaagcccacagtgctttggag
gcggctttagggcctgaattcaaaagcatggagttacagaacggtgacgaagggcaacat
attgcaagaaagagcacttgtgttgtgtccactgttgaaaacgacatggataatatgact
gatgcagaggaggaggctggtgatgaccaagtagaagaggaggactttacagaggtcaag
gctgaagacctagcagaggaggagaaggctgaagacgtagcagaaaaggctagcgaccta
gtggaggaggaagatgacgacgacgacctagcggcagacgaggctgacgacgacccagcg
gaggaggaagccaacaacggcctggaagaggaggaggccgacaaagaccttgaggaggca
gcaaccgacgtagcgatgaaggaaaccaatgtaggtgtagaggaggtcaatgacatggca
gcaaaggaccctgataacccagaagcagaggaagatgagaaggctggccccgcaacagct
ggtgaggctggccacacagcagtggaggagtcagacgtggggcagcataatgaacaggaa
gtgtctgatgatcctaaaatgaaagccaaccaaaccgaaactaatcgaaccaaaaagaga
attaaagctgaagcatgtgatgatgggctagtgtcagctggggaaatgtctcttgatcaa
gatattatgtctgtgcctccttcggttcccgaagagctttttcagatggtggaaagtctt
gcagattccactatgctctcacagtctgacaccaatttggtcatagacgctgttaaaaag
tcaagtggaaactcaaaagactctcaacctacccagcccaaggtgaagaacctcatagtt
aaactgactcctgtgccagtcgtgacgacacgtgggtcaaggtcctccgtgtccaaaaat
agggaaaaggctggagagactaaaaaaaagggtgtagaagaccgtgagaaggagaaagac
gatgctgctaaagcagcaggagatgggacagccagcccaccacccagccgtcgctctagt
agattgaagaccactcccctgagaaagcaggctgagaataagggcaaggaagagtcatcg
gagtcagatgaagatcgtaagagcaagtctaaatctttcaagaaatccagtaaagaaaac
aaagagaatgcgaaggagaccaatgtttcagaaaagaagacgatggattctgactcggat
gaaattcctaacgtactgctggagaaagcggcagcaggccgcagcacagatgaggaacag
gaaagcacaagtgctaaaaagtgtttattcaaacaaaaaaacacatctacacaggacacg
gacaaggcttccaaacgtaaaaggaagtccgaaagctccgactcagacttggggatcaaa
agtaaaaagatgtccaagaagaagacgaaacagactggctcagactcaactaactctgac
tctgaccaagagaaggagtctaagagtaaagcggccacagtgaagaggagatctagtcgt
gtaaagaagcaagatgaagccaaagaagaagaaaaaagctcacctgagaggaaggctgct
aagcggaaaaggtcctatgaagctaagcgcaagggaaggagtctcaaatcagcttccaag
ctgcagtcgtcttcctccagtgaggaagagcagcacgctgaaggcgattccgcagaggac
agcgacgagcaaaaaatcaagcctattgtggaggatggcgtggttggaggaagtggaccg
gtccatcagtcctcaggcgacgaggaggatgataatgcgggagtatctcaggattgtgaa
gatgatgacgacgatgatcctgaaaacagaattgcaaagaaaatgcttcttgctcaaata
aagtccaactattcttctggagctgagagctcctctgataatggagaagatgaggatgga
aagtcctccaggaaagttaaaaaggatgacggcgatgatgatgatgatggtgatgaagag
caacacgacgaggattcagaagactccagttctgaagttgaagtgaagaagcacggagga
cgccacaaattgcttcgtcataaactctcgctgagtgaggctgaatccggagaggagaaa
gctgccagtaaaggcaaaaaggggagcaagaagaagtcggggaagaaagttcacagtgat
gcctcttcagactccgactctgactttgagaagtcagagtccagtgaagagtcggggcta
agcgaagagcttactgaatcggagaacgaaggaaaaagtcgtaagaccagagcttctaag
aaaaaggatgaagcaaaacggagaagttacaagaagaagcagcagcagaagaagaagaag
cgacgcaggatcaaagttcaggattcctcttccagcaatgagagtggaaaggaaggtgat
gatgatgatgaagacaacaaaggacgcaaaaagatccgcaaaatcctgaaggacgacaag
ctgcggacggagacgagagatgcactgaaagaggaggaggataggagaaaacgtatagct
gagagagaggcactccgggagaaacttcgagaggtgcttttgttgaaggagtctccccat
gtcatctctccctgtcccattaccaccaaactggtgcttgatgagcatgaagagaccaag
gagccgctagtgcaggtgcacaggaaccttgtcacaaaactcaaacctcatcaggttgac
ggggtgcagttcatgtgggactgttgctgtgaatctctaaaaaagatcaaaaagtcttct
ggctccggttgcattctcgcccattgcatgggtctggggaaaactctgcaggtggtgacg
ttacttcacacgttgctgctttgtgagaagctcgacttcaccacagcactggtggtttgt
cccctgaacactgtccttaattggctcaacgagtttgagaagtggcaagtaggattgaag
gatgacgagagtttagaggtggttgagctggccacagtaaagaggccacaggagcgagca
tatgctcttcagcgatggcaagatacgggtggcgtaataatcattggctatgagatgtac
agaaacttgacgcagggcagaaacatcaagagcaagaaactcaaagagatctttcagaag
acactggtagatccaggtccagacatggtcatctgtgatgaaggtcacatcttgaagaac
gaagcgtctgctgtgtccagagcgatgaattctatcaggacgaggaggaggattgtgctg
actggaactcctcttcaaaataaccttgttgaataccactgcatggtgaacttcatcaag
gagaacttgcttgggtctgtcaaggagttcaggaatcgcttcattaaccccattcagaac
ggtcagtgtgccgactccaccctgcaagatgtccgaatcatgaagaagagggctcacatc
ctctatgagatgctggccggctgtgtccagaggaaagattactctgcgctgactaagttc
ctgccaccgaaacacgagtatgtgttgtcggtcagagtgactccgattcagtgtaaactc
taccggtactacctggagcacttcacaggtgttggaaatgctatggaggggggccggggc
cgcggagggaccaaactcttccaggatttccaggtgctcagcagaatctggacccatccc
tggtgccttcatctggactacgtcagtaaagaaaacaggggtttctttgacgaggacagt
atggacgagttcatcgcttcagaaacggaagaatcgtccatgagtatgacctctgaggat
gagaaggccaaaaagaaaaagaagcttgggaggggaaaaaagagaggctctgatgactca
gacagtgatgaagtggaggtcatcaaggagtggaacacctgcactcggggcaaaaatgga
gaaagtcgaagcagaccccagttagtagaagaacctcaggcccctagctcaccaggtcat
cccggtcatgactggcacaagacgtttgtcagtgatactgacggcgaggtcctggagcac
tctggaaagctgatgctcctgtttgagatcttgcgcatggcagaggacgtggacgaaaaa
gtgctggtgttcagtcagtcgctcatctctctggacctgatcgaggatttcctggagctg
gctaccaaagctaaagatgatgatgaaatagtctctccatacaaaggtgaaggcaagtgg
ttcaggaatattgactactatcgtctggatggctccacaaacgcaaccaccagaaagaag
tgggctgaagagtttaatgacaccagtaacataagaggtcgtttgttcctaatttcaacg
cgagctggctctcttggtatcaacctggtggcagccaacagggtaatcatctttgacgcc
tcctggaacccctcctacgacgtccagagtatcttccgggtctaccgttttggccagatt
aggactgtttttgtgtacaggttcctggctcagggtacaatggaggcaaagatctatgac
cggcaggtaaccaaacagtctctggcattccgtgtggtggaccagcagcagattgagagg
cactttacaggtgtcgagctggcagagctctacacctttgagccggaaatgctggatgat
cctacaacaaagaagagcaagaaagctacacccgtgctccccaaggatcccttcctggcc
gagatgctgcagaataataaggaccagattgtgtgttaccatgaacacgactccctgcta
gaccacaaggaggaggaagccctgagcgaggaggatcgcaaggctgcctggacagagtat
gaagcagagaaaaagggtgtgttcatgagggacaactaccagacagcatacccccagatg
gacacgaacaactccaactacttctccttcaacatggcagctttggcctccatgaccaac
cagcagctggaggaccttataaaccagggacgacagaaagtcattgaagcaacaaatgca
ttgaaggctgtcgcacgggagtcactggaagataccatcgccagactgtggaaggagaac
ccagatctcacagagactcaggtccagtccatggctctggctcatcaggtcactctggag
acggagatcaagcgcagggaatccgtgtaccgggacgttctcaccaggcagcagacgctt
atgatgtacgtccagaagatggtcaccaacaggaaggtgcaggagcagcagatggccatg
gctaaccaagccagctacctgaaccagctggcaatgcagaacggcatgatgggaggtggc
gggctcagtcagatggatctggtggggctttaccagcagctccacggcctgggctctcat
caaggcatgggcaagaatcctgggccctccaagggcctgtag
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integrated database retrieval system
