Pseudoliparis swirei (Mariana hadal snailfish): 130209217
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Entry
130209217 CDS
T09868
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130209217 (fbxo38)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130209217 (fbxo38)
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Ortholog
Paralog
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
130209217
NCBI-ProteinID:
XP_056294700
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All DBs
Position
19:complement(9623187..9643383)
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AA seq
1201 aa
AA seq
DB search
MGPRKKASKLQPIVGTCEGELVLRPSEPKDYINELSHEVLCHIFRYLPMKDIMCMECLSR
KLREAVTLYLRVVKVVDLCAGRWWEYMPSGFTDGSFLLLLKKMPDLEQLYGLHPRYLERR
RVRGYEAFSIPGVLEALQACPNILGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIP
AENKLTIPITAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVSLRTFV
MRNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTI
VFGACKNALEVDLGYLIITAARRLHELRIQPSLTKDGVFSALKMAELEFPQFETLHLGYV
DEFLLQCKLSHSEMVKYGLADVIENPGIITDIGIKVVNEVFTNIKYLLIYNCPHLHNPHH
WITDQSRWSRLVDLTLVRCHAIKLESFAQFIELLPSLEFICLDQMFREPPKGCARVGLSA
GTGIGVSSALVSNQNSNNDNDNNNNNNHHHNNNNEANMPAAPPPVVNNIINNNNNQRRQQ
NNAPVEVNGMEEVEEEEAVLLEEDNMEAGPQMELKRTEGEVRVDVADGCPAGAPHAPDEE
QAGPSGLVQQCRPACATVPKPPLVISDSDSEEEEGLVSRLMPASCLQQPASCSEGKGKTP
VRRGNNVAVSEAISANETKTLVLDSSCEKSCQVTSEQIKADMKAAVENSRRTSVKGIATE
AVETAARPGADSGPLRGPGAAARTGVRPVTGSVGRVGPGAATSRQVGGCGRLVVGNSHQA
TTTTDRATGTGRTNDYAESPSGTRTGASCTRETGVRQSSAPACADSLDPRAAAVNHAARR
PAQPTGQGQRLPTPAGSPYATFSGSQKGEATDEDFIPRRPLTRSCTRTSSVSLISETDLS
RARPRVSVRRKRMADKSTSTSDPVTEDDHVQILSLKSKNLVGITLTNCGITDLVLKDCPK
MMFVHATRCRVLKQLRVESAPIVNRFDYAQCKKLDMEQVLDQILRMPPERNRIIYMRPMH
QIDSVALERQLFQGPYPYHIAIVHEFSNPPNIRNKVRIRSWMDTIANISQELIKYEFFPE
ATRTEEDVKKNPTYPWGREIYTLEGLVDGAPYSMITDFPWLRTLRAADPNSYARYDFEDD
ESTTIYAPRRKGQLSADICMETIGEEISERRQSKRGVFQRVVVLFLHHCDTPGEPVDDDY
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaggaagaaggcctctaaactccagcctattgtgggcacctgtgaaggggaa
ctggtcctgagacctagtgagcccaaagactacatcaatgagctgtcccatgaagtcctc
tgtcacatattcaggtaccttcccatgaaggacatcatgtgtatggagtgtctgtccaga
aagcttcgggaagctgtgacactgtacctgcgagtggtcaaggtagtggatctgtgtgct
ggtcgctggtgggagtacatgccttcaggctttacagacggcagctttctgctccttttg
aagaaaatgccagatctggagcagctatatggcctccaccctcgatacctggagaggaga
cgagtccgtggctacgaggccttcagtatacccggagtcctggaggcactacaagcctgt
cccaatatactgggggtggagacatcccatctggagctggtggaagccatatggaactac
atgccccaggttcatatcctggggaagttccgtaaccgtaacggagcttttcccattcct
gctgagaacaaactgactatccccataacggcaaaaatccagacactacatctagtaggt
gtgaatgtcccagagatcccctgtgtgtccatgcttcgccacctttatctgaagtgggtc
cgtctcaccaaaccacagccgtttaaggactttctgtgtgtgagcctgagaacctttgtc
atgcggaactgtgcaggaccgaccaactccctcaaatatgttcccttggttactgggtta
gcatcagcccgcaacctggagcagctggagttggttagagtgcccttcctgggagggctg
atccaacacgtagtcgaggacagttggaggtcaggaggatttcggaacctccacaccatt
gtgtttggcgcctgtaagaacgctctggaagtggacttgggctacctcatcatcaccgct
gctcgcaggcttcacgagctgcgcatccagccttcgctgacgaaagatggagtcttctcc
gctctcaaaatggctgaactagagtttcctcagtttgagactcttcatctgggatacgtg
gatgagttcctgctgcaatgtaaactgagtcactcggagatggtgaagtacggtctggct
gatgtcatcgagaaccccggcatcatcacagatatcggcataaaggtggtgaacgaggtg
ttcactaatattaaatacctgctcatctacaattgtccacacctgcataaccctcaccac
tggatcacagatcagtccagatggagtcgcctcgttgacctcactctggtccgctgtcat
gccatcaaactagaatccttcgcccagttcatagagttactgcccagtctggagttcatc
tgtctggaccagatgtttcgagaaccacccaagggctgtgccagggtaggcctgagtgca
ggaactggtattggagtgtcctcagcactggtcagcaaccagaactctaacaatgacaac
gacaacaacaacaacaacaaccaccaccacaacaacaacaatgaggccaacatgcctgct
gctcctccacctgtcgtcaacaacatcatcaacaacaacaacaaccaaagacggcagcag
aacaatgcaccagtggaggtaaatgggatggaagaggtagaagaagaggaggcggtgctg
ttggaggaggacaacatggaggctggtcctcagatggagctgaaaagaacagaaggggag
gtgagagttgatgtggctgacggttgtccagcaggagcgccacacgctcctgatgaggag
caagcaggtccaagtggtttagtccagcagtgtagaccagcctgtgccactgttccaaag
cccccgctggtcatctcggactccgacagtgaagaagaggaaggcctcgtttcgaggcta
atgccagcttcctgtttgcagcagccagcttcctgttcagaaggtaaaggaaagactcca
gtgaggcggggcaacaatgtggctgtatcggaggcgatctcggcaaatgagacaaagact
ctggtgttggacagcagctgtgagaagagctgtcaggtgacaagtgaacagattaaggct
gacatgaaggctgctgtggagaacagcaggaggactagcgttaaaggaattgccaccgag
gctgtggagactgctgcaagacctggggctgacagtgggccactacggggtcctggggca
gcagcaaggaccggggtgaggccagtgactggatcagtgggcagagttggccctggagca
gccacatccaggcaggttggtggatgtgggaggctggtggtggggaacagccaccaagca
accacaaccactgacagagcgacaggaactggcaggactaacgactacgcggaaagccct
tctggtacacggactggggccagttgcacaagggagactggggtgaggcagagctctgct
cctgcctgtgctgacagtctggatcccagagctgctgctgtaaaccatgctgctaggaga
ccagcgcagccgacaggacagggacaacgattgcctacccctgctggatcgccctacgct
accttttcaggttcacagaagggtgaggccacagacgaggacttcattcctaggcggcct
ttgacccgatcctgcactcgtacgtcctctgtgtccctgatatctgagacggatctttcc
agagccaggcctcgagtatcagtgaggaggaaacgaatggccgacaagtccaccagcacc
tcggacccggtcactgaggacgaccacgtacagattttgtctctgaagagtaagaacctg
gtgggcatcacgctgaccaactgtgggatcactgacctagtcctcaaagactgccccaag
atgatgttcgttcatgccaccagatgtcgagtgttgaaacagctgcgggtcgagagcgct
cccatcgtgaacaggtttgattacgctcagtgtaaaaagctggacatggaacaggtcctg
gatcagatcctgagaatgcctcccgagaggaaccgcatcatctacatgcgccctatgcac
cagatcgactcggtagcgttggagcggcagctcttccaggggccctatccctatcacatc
gctatagtgcacgagttcagcaaccccccaaatatacgcaacaaggttcgcattcgcagc
tggatggacacaatagccaacatcagccaagagttgatcaagtacgagttcttcccagag
gctacgaggacggaagaggatgtgaagaagaatcccacatacccctggggccgggagatc
tatacactggagggactggtggatggtgcaccatacagcatgataacagacttcccctgg
ctgaggactctgagagcagctgatcccaacagttatgcccgctatgactttgaggacgac
gaaagcaccaccatctacgcacccaggcgtaaaggccagctgtcagcggacatctgcatg
gagaccatcggggaggagatctcagagcgccgacaaagcaaaagaggagtttttcagagg
gtggtggtgctcttcctccatcactgtgatacaccaggagaacctgtggatgatgactac
atctag
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integrated database retrieval system
