Pseudoliparis swirei (Mariana hadal snailfish): 130209219
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Entry
130209219 CDS
T09868
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130209219 (dbr1)
03009 Ribosome biogenesis [BR:
pswi03009
]
130209219 (dbr1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130209219 (dbr1)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
90S particles
RNase
130209219 (dbr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
130209219
NCBI-ProteinID:
XP_056294707
LinkDB
All DBs
Position
2:18468822..18473421
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AA seq
571 aa
AA seq
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MKIAVEGCCHGELDKIYETIGYLEKKESIKVDLLLCCGDFQAVRNEGDMNCMAVPLKYRM
MQTFYKYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVVRYKGIRI
GGVSGIFKSHDYRRGHHEFPPYDRSTLRSVYHVRNIEVFKLKQIQMPIDIFMSHDWPRGI
YHHGCTAELLRKKKFLRQEVESNSLGSPAAEELLAHLQPKYWFSAHLHVKFAAVKQHPPK
PNATPRVTKFLSLDKCLPHRDFLQIVDVAERPGSSEGLEYDPEWLAILKATNSLQSTDPH
PWNPPENNGLHERWDFRPSEAAMMQVAKEFSGELAIPDNFSQTVQPYDPKGPKQHASLSW
NTNPQTTELCATLGLTDLYAHALQGGGNLSRIQAGAAGDDADDDCGESADERGEYPTDTS
GFSRSYNPDEITIEDEWEEEEGTEEVEGSCDLKSSVRGENPPDGPAGEVQTPGRMVLPAP
KSDTSDPSPLMNLPPPSHSTPAVAARSGAEREEPCKDKDDVADDDDDDDASALATLKRTS
DEAEAPGSKGTTPRIKRRNQVIYTTVEGDDE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcggtagagggctgttgccatggagagctggacaaaatctacgagacaatc
ggctacctggagaaaaaggaatcgatcaaagtggacctgctgctttgctgtggagacttc
caagcggttcgaaatgaaggagacatgaactgtatggctgtaccactcaaatacagaatg
atgcagaccttctacaaatactattctggagagaagaaggctcccgtcctgaccgtcttc
attggagggaaccatgaggcttccaaccacctgcaggagctgccgtatggcggctgggtg
gcacccaacatttattatctaggttatgctggtgttgttcgctacaaagggataagaatc
ggtggcgtatctggaatctttaaatcacatgactacagaaggggtcaccatgaattccct
ccatacgatcgcagtacacttcgaagtgtataccacgtccgaaatattgaggtgttcaaa
ctgaaacagatccagatgcccatagacatcttcatgagccacgactggcctcgtggaatc
taccaccatggatgtacagcagaactgttgaggaagaagaagtttctgcgtcaggaagtg
gagtccaactctctgggaagtcctgcagctgaggagctcctcgctcacctccagcccaaa
tactggttctctgcgcatcttcacgtgaaattcgctgccgttaagcagcatccgccgaaa
cctaatgctaccccacgtgtgaccaagttcctgtccctggataaatgtctgccccacagg
gacttcttacagattgtggatgttgcagagagaccaggttcctctgagggtcttgagtat
gatccagagtggcttgctattctaaaggccaccaacagtctccaaagcacggaccctcac
ccctggaacccccccgagaacaatggcctgcacgaacggtgggacttcagaccttcagaa
gcagcgatgatgcaggtggcgaaggagttcagcggcgaactcgccattccggacaacttc
agccagacggtgcaaccctacgaccccaaagggcccaagcagcacgcctccctcagctgg
aacaccaaccctcagacgaccgagctctgtgccacgttggggctcaccgacctctacgcc
cacgctctgcagggaggtggcaacttgagcagaattcaggccggcgcggcaggggacgac
gccgacgacgattgtggcgaaagtgcagacgaacgcggcgagtacccgaccgacacgtca
ggattttcgaggtcgtataatcccgatgagatcaccatagaggacgagtgggaggaagag
gaaggaacggaggaggttgagggaagctgtgacctaaaatcatcagtaaggggagagaat
ccccctgatggacctgcgggtgaagtccaaacccccggccgaatggttctgcccgcgccc
aaatcggacacctcggatccgtccccactgatgaacctgccacctccatcccactcgacc
ccagcagtggcggctcgctctggagcagaaagggaagaaccctgcaaggacaaagatgat
gtcgccgatgatgatgatgatgatgatgcgtcggcattagctaccctaaaacgtaccagc
gacgaagccgaggctcctggcagtaaaggtacaactcccagaatcaaacgccgaaaccag
gtcatctatacaacagtggagggtgacgacgagtga
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