Pseudoliparis swirei (Mariana hadal snailfish): 130209238
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Entry
130209238 CDS
T09868
Name
(RefSeq) UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1
KO
K09667
protein O-GlcNAc transferase [EC:
2.4.1.255
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00514
Other types of O-glycan biosynthesis
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130209238
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130209238
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130209238
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130209238
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.255 protein O-GlcNAc transferase
130209238
Glycosyltransferases [BR:
pswi01003
]
O-Glycan biosynthesis
O-linked GlcNAc type
130209238
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130209238
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130209238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_41
TPR_1
TPR_11
TPR_2
TPR_17
TPR_8
TPR_12
TPR_19
TPR_16
TPR_14
TPR_10
TPR_7
TPR_Slam
TPR_CcmH_CycH
TPR_6
TPR_9
NatA_aux_su
TPR-S
ARM_TT21_5th
TPR_15
TPR_MalT
FAT
TPR_NPHP3
ARM_TT21_C
HAT_PRP39_C
TPR_21
ARM_TT21_2nd
MIT
Wzy_C_2
SHPRH_helical-1st
ANAPC3
HAT_PRP39_N
BTAD
SNAP
HAT_Syf1_CNRKL1_N
EST1_DNA_bind
ARM_TT21
Suf
TPR_EMC2
TPR_5
TPR_20
HAT_Syf1_CNRKL1_C
Alkyl_sulf_dimr
Tcf25
Motif
Other DBs
NCBI-GeneID:
130209238
NCBI-ProteinID:
XP_056294738
LinkDB
All DBs
Position
19:complement(11295503..11314997)
Genome browser
AA seq
1054 aa
AA seq
DB search
MATSVGNVADSTEPTKHMLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLL
LSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKP
DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACY
LKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI
FDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA
NALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEF
AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR
AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT
DYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCQDKVHALIK
INALHKPAFEHPKDLKASGGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPEKFEVFCYALS
PDDSTNFRVKVVAEAHHFTDLSQIPCNGKAADRIHQDGIHVLVNMNGYTKGARNELFALR
PAPVQTMWLGYPGTSGAPFMDYIISDKETSPLEVADQYSEKLAYMPHTFFIGDHANMFPH
LKKKAVIDFKSNGHIFDNRIVLNGIDLKAYLDSLPDVKVIKMKCDNNQEATVDTNGTLSM
PVIPMNTAAEAIINMINQGQIQVTINGFTVSNGLATTQINNKAATGEEVPRTIVVTTRSQ
YGLPEDSIVYCNFNQLYKIDPPTLQMWANILKRVHNSVLWLLRFPAVGEPNIQQYAQNMG
LPGSRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASR
VAASQLNCLGCPELIAQNRQDYEDIAVKLGSDMEFLKMVRARVWKQRICSPLFNTKQYTI
DLERLYLQMWEHHSNGKKPEALVNVHTLEASENP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcagtgggaaacgtggctgatagcacagaaccgacaaaacatatgctttcc
tttcaagggttagctgagctggcgcaccgagagtatcagtcaggggactttgaggcagct
gagcgccactgcatgcagctttggagacaggagcctgataacacaggcgtgctgctgctc
ctgtcctccatccacttccagtgccgaagactcgacaggtctgctcacttcagcacgttg
gccatcaagcagaacccaatgttggcagaggcctactccaacctggggaatgtgtacaag
gagcgtgggcaactgcaggaggccatagagcattatcgccatgctctgagactgaaacca
gattttattgatggatacatcaacttggcagctgctctggtggccgcaggagacatggag
ggagcagtgcaggcttatgtgtctgccttacagtacaaccctgatctttattgtgtgcgg
agtgacttgggcaacttgcttaaagcccttgggcgtttggaagaggccaaggcttgctac
ctgaaagccattgagactcagcccaactttgcagtggcttggagcaacctgggctgtgta
ttcaacgctcaaggagagatatggctggccatacaccattttgaaaaggctgtgactctg
gacccaaatttccttgacgcatacatcaatttaggaaatgttttgaaagaggcccgcatt
tttgacagagctgtggctggatacctgagagccttgagtctgagccccaaccatgcggtt
gtccatggaaacctggcttgtgtctactacgagcaaggccttattgatctggctattgat
acctaccgccgcgctattgaattgcagccccacttccctgatgcttattgtaatttggca
aatgccctgaaggagaaaggcaatgtgtctgaagcagaagagtgctacaacacagccttg
cgtttgtgtccaacccacgcagactctcttaacaacttggccaatatcaagcgtgagcaa
ggcaatattgaagaggcagttcagctctataggaaagcactagaggtgttcccagagttt
gctgcagctcactccaaccttgccagtgtcctgcagcagcagggaaaactccaggaggcc
ctcatgcactacaaggaggccatcagaatcagccccacatttgcggatgcctactcaaac
atgggcaatacacttaaggaaatgcaagatgtacagggagcactgcaatgctacacccgt
gccatacagatcaaccctgcctttgctgatgctcacagtaatttggcctctatccacaag
gattcaggaaacattccagaggccatcgcatcttaccgcacagccttgaaactcaagccg
gacttccctgatgcttactgcaacttggcacattgtctgcagattgtgtgtgactggaca
gattatgatgagcggatgaagaagcttgtgagcattgtggctgaccagctggaaaagaac
cgcttgccttcagtgcacccacaccacagcatgctgtatccactctctcacggtttccgc
aaggccattgctgaacgccacggaaacctttgccaggacaaggtacacgcactgatcaaa
atcaatgcactgcacaaacctgcgtttgagcatccaaaggacctgaaggctagcggtggt
cgtctgcgtgttggctacgtcagctctgacttcggcaaccaccccacttcccacctcatg
caatccattcctggaatgcacaatcctgagaaatttgaggtgttctgctatgcgctcagt
cctgatgatagtaccaacttccgtgtgaaagtggtagcagaagctcatcatttcacagat
ctctcacagattccttgcaatggcaaggcagctgatcgcattcaccaggatggaattcac
gttctggtcaacatgaacggatacaccaagggagcccgaaatgagctgtttgccctccgc
cctgcccccgttcagactatgtggctgggttatcctggaactagtggggctcccttcatg
gactacatcatttctgacaaggaaacgtcacctttggaagtagctgaccagtattctgag
aaactggcctacatgcctcatactttcttcatcggagaccacgctaacatgttcccccac
cttaagaaaaaagctgtgattgacttcaaatctaatggacatatctttgacaaccgcatt
gtcctaaatggtattgatctcaaggcttacttggacagtctcccagatgtgaaagtgata
aagatgaagtgtgataacaaccaggaagctactgtagatacaaacggaactctgtccatg
cccgtcatccccatgaacacagcagctgaagcaatcatcaacatgatcaaccaaggccaa
atccaggtcacaatcaatggcttcacggttagcaatggcctggcaaccacacagatcaac
aacaaagctgccactggggaggaggtgccacgcacaattgttgtgacaacccgctcccaa
tatggtctcccagaagactctattgtctattgcaactttaaccagctctacaagattgac
cccccgactcttcagatgtgggccaacattctgaagcgtgtgcataacagcgtgctatgg
cttcttcgattcccggctgtcggcgagcccaacatccagcagtacgctcagaatatgggt
ctgcccggctctcgcatcatcttctctcctgtggcccccaaggaggagcatgtgagaagg
ggccagctggcagatgtgtgcctcgacactcctttatgcaatggtcacaccacagggatg
gatgttctctgggctggaacacccatggtcaccatgccaggtgagacccttgcctcccgt
gtggctgcctcgcaactcaactgtctgggctgccctgagctaatagcacagaatcgtcag
gattatgaggacatagcagtcaagctgggctctgatatggaattcctgaagatggtccga
gcacgcgtttggaagcagcgaatctgcagccctcttttcaataccaagcagtacacaatt
gacctggagaggctctatctgcagatgtgggagcaccatagcaatggcaaaaagcctgaa
gccctggtcaatgtccatacattagaggccagtgagaatccctga
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