Pseudoliparis swirei (Mariana hadal snailfish): 130209242
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Entry
130209242 CDS
T09868
Symbol
ctnna1
Name
(RefSeq) LOW QUALITY PROTEIN: catenin alpha-1
KO
K05691
catenin alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130209242 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130209242 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130209242 (ctnna1)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130209242 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Motif
Other DBs
NCBI-GeneID:
130209242
NCBI-ProteinID:
XP_056294747
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All DBs
Position
19:1339348..1402528
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AA seq
907 aa
AA seq
DB search
MTNINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LASSVENATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGESMRQASGDFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEESLVKVRNAGTEQDLGIQYKAL
KPEVDKLNMMSAKRQQELKDNHHKDQMAAARGVLQRNIPMLYTASRACLQHPDVAAYKAN
RDLIFKQLQHAVSGISNAAQATASEDSALNQPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKDR
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHATKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDLFKEQWEKQVHVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGIYTEKVLEATKLLTNSVMPRFTEQVESAVDALSA
NSSLPVDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGKSARAIMAQLPQEQRAIIAEQVASFQEEKSKLDAEVSKWDDNGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVIGAAKNIAEAGSRMDKLGRAIADNCPDSTCKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGEMVVSGLDSAMSLIQAAKNLMNTVVSTVTALYGLR
TGHQKNKNMEALNMPAISWRMKAPEKKPLVKREKQDDGQGNKVKRSSLKKQVNPVQALSE
FKAMDSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacatcaacacggccaacatcaacttcaaatgggacccaaaaagtctcgagatt
cgtactctggccgtggagaggctgctggagcccctggtcacgcaggtcaccacgttggtg
aactccagcaacaaaggcccgtccaacaagaagaaagggcgctccaagaaggctcacgtc
ttggcgtcgtcggtggagaacgccacccagaacttcctggagaaaggagaaaagattgca
aaggaaagtcagttcctaaaggatgagctgactgctgccgtggaagacgtgcgcaagcaa
ggcgagtcgatgcgccaggcttctggagactttgccgaggacccgtgttcctcggtgaag
aggggcaacatggtccgggccgccagagccctgctgtcggccgtcactcacctgctggtg
ctggccgacatgtcggacgtctacaagctgctgctgcagctgaagctggtggaggagagt
ctggtgaaagtgcgtaacgccggaacggagcaggacctggggatccagtacaaggccctg
aaaccagaggtggataagctgaacatgatgtccgccaagagacagcaggagctgaaagac
aaccaccacaaggaccagatggcggctgcccgcggcgtgctgcagaggaacatccccatg
ctgtacacggcgtcccgcgcctgcctgcagcaccccgacgtggcggcctacaaggccaac
cgggacctgatcttcaagcagctgcagcacgccgtctccggcatctccaacgccgcccag
gccacggcctccgaggactcggccctcaaccagccggccggcggcggagagctggcctac
gccctcaacaactttgacaaacaaatcatcgtggacccgctggcgttcagcgaggagcgc
ttccgcccctccctggaggagcgcctggagagcatcatcagcggcgccgccctcatggcc
gactcctcctgcacgcgcgacgaccgccgcgagcgcatcgtggccgagtgcaactccgtg
cgccaggctctgcaggacctcctgtccgagtacatgggcaacgcggggaggaaggaccgg
agcgacgccctgaacaccgccatcgaccgcatgaccaagaagaccagagacctccgcaga
cagctgcgtaaggccgtgatggaccacgtctccgactccttcctggagaccaacgtgccg
ctgctggtcctgatcgaagccgccaagaacggcaacgagaaggaggtgaaggagtacgcc
caggtgttccgcgagcacgccaccaagctgatcgaggtggccaacctggcgtgctccatc
tccaacaacgaggagggcgtgaagctggtgcgcatggcggcgtctcagctggagactctc
tgccctcaggtgattaatgcggcgctggccctggctgccaagcccaacagcaaggtggcc
caggacaacatggacctgttcaaggagcagtgggagaagcaggtccacgtgctcaccgac
gccgtcgacgacatcacgtccatcgacgacttcctgtgcgtgtccgagaaccacatcctg
gaggacgtgaacaagtgcgtcatcgctctgcaggagaaggacgtggacggtttggatcgc
accgccggcgccatccggggccgcgccgcccgggtcgtccacgtggtcacgtccgaaatg
gacaactatgaacccggcatctacacggagaaggtcctggaggccaccaagctgctcacc
aacagcgtcatgccgcggttcacggagcaggtggagtccgcggtggatgccctgagcgcc
aactcctcgctccccgtggacgagaacgagttcatcgacgcgtcgcgcctcgtgtacgac
ggcatccgagacatccgcaaggccgtgctcatgatcagaactccggaggagctggacgac
tccgactttgagaccgaagacttcgatgtgcgcagcaggaccagcgtgcagacggaggac
gaccagctcatcgccgggaagagcgctcgggcgatcatggcccagctgccccaggagcag
agggcgatcatcgccgagcaggtggcgagcttccaggaggagaagagcaagctggacgcc
gaggtctccaagtgggacgacaacggcaacgacatcatcgtgctggccaagcagatgtgc
atgatcatgatggagatgaccgacttcaccaggggtaaagggcctctgaagaacacctct
gatgtcatcggcgccgccaagaacatcgccgaggccggatcgcggatggacaagctgggc
cgcgccatcgccgacaactgccccgactccacctgcaagcaggacctgctggcctacctg
cagcgcatcgccctgtactgccaccagctgaacatctgcagcaaggtcaaggccgaggtg
cagaacctgggaggagagatggtcgtgtccgggctggacagcgccatgtccctcatccag
gccgccaagaacctgatgaacaccgtggtgtccaccgtcacagccctgtacgggctccgc
actgggcaccagaagaacaagaacatggaggccctgaacatgcccgccatctcctggagg
atgaaggcgcccgagaagaagccgctggtgaagcgcgagaagcaggacgacgggcagggc
aacaaggtcaagaggtcgtctctgaagaagcaggtcaacccggtgcaggcgctgagcgag
ttcaaggccatggacagcatctag
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