Pseudoliparis swirei (Mariana hadal snailfish): 130209245
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Entry
130209245 CDS
T09868
Symbol
hoxd9a
Name
(RefSeq) homeobox protein Hox-D9a
KO
K09294
homeobox protein HoxB/C/D9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209245 (hoxd9a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130209245 (hoxd9a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130209245
NCBI-ProteinID:
XP_056294762
LinkDB
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Position
2:complement(9599629..9601874)
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AA seq
271 aa
AA seq
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MSRKRSKMSSSGTLSNCYVDAIMGQEPEDAYGARFIQAPHTVTPRPPGAGDNADFSSCHF
APKSAVFSSSWSSVHPQGIYHPYMHHHHHHQAHLPASDGRYVGIRSWMDPISNHVSFAGF
HSSGRSYGTKPEVSPPKATECDALEAAARPMAGEFACGVSDCQEKATTEHSGSELSIHSE
PREEKQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRFEVARIL
TLTERQVKIWFQNRRMKMKKMNRERSGRELL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggaagagatcaaaaatgtcttccagtggcactctcagtaactgctatgtggac
gctatcatggggcaggagccggaggatgcgtacggggctcgctttattcaggctccgcac
acggtgaccccgaggccgccaggtgctggggacaacgccgacttctcctcttgccatttt
gcaccaaagtcggccgttttctcctcgtcttggtcctcggttcacccgcaggggatttat
catccgtacatgcaccaccaccaccaccaccaggctcacctccccgcctcggacggcaga
tatgtgggcatccgctcctggatggaccccatctccaaccacgtttcgttcgccggattt
cactccagcggccgctcgtacggaacaaagccggaggtctcgccaccgaaagcgacagag
tgcgacgcgctggaggcagcggctcggccgatggccggggaattcgcgtgtggagtatcg
gattgtcaggaaaaagcgaccacggagcacagtggaagtgaactttcgatccacagcgag
cccagagaggagaaacaacaactggacccaaacaaccccgcagcaaactggattcacgca
cgctccacgagaaagaagcgatgcccgtacacgaaatatcagactttagagctggagaag
gagttcctcttcaacatgtatctgaccagagaccgacgctttgaagtggcccgcatactc
actttaaccgagagacaagtgaagatctggttccagaaccggaggatgaaaatgaagaag
atgaacagggagaggagcggcagagagctgctctga
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