Pseudoliparis swirei (Mariana hadal snailfish): 130209282
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Entry
130209282 CDS
T09868
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130209282 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130209282 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130209282 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130209282 (csf1ra)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130209282 (csf1ra)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130209282 (csf1ra)
CD molecules [BR:
pswi04090
]
Proteins
130209282 (csf1ra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
Ig_2
Ig_PDGFR_d4
ig
Ig_VEGFR-1-like_5th
C2-set_2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
130209282
NCBI-ProteinID:
XP_056294820
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All DBs
Position
19:complement(13576568..13587819)
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AA seq
977 aa
AA seq
DB search
MQSYLALLLGIVASAASVEWRRPVIKFNSKVVQSSELVVRPGTPLNLRCEGDGPVNWQTR
LAKHRRFVSRGNGKVRTLKVERPSAEFTGTYKCVYTAGSQKLSSSVHVYVKEPNRAFWTS
STSLRVVKKEGEDHLLPCLLTNPAATDLGLRMDNGTSVPPGMNFTVYRHHGILIQRLHPG
FNADYVCTARVSGVEMISKAFSIYVIQKLRFPPYVLLETDEYVRIVGEELKIRCTTHNPN
FNYNVTWKYTTKSKPTIEERVRSGGENRLDIESILTIPAVDLTDTGNISCFGTNEAGVNS
SSIYLLVVDDAYIRLLPQLSPKLAHQGLSVEVNEGEDLELTVLIEAYPEITAHRWHTPTP
PNTSTQEHKLIRYNNRYHATLKLKRMNAQEQGIYTFYAKSDLANASITFQVQMYQRPVAV
VRWENTTTLTCTSFGYPAPKIIWYQCFGIRPTCNENTTGLQLAIPLQAPTVEVQREEYGA
VEVESVLTVGPSSRRMTVECVAFNRVGVSSDTFAMEVSEKLFTSTLTGAAGILTILLVLL
VFLLYKYKQKPRYELRWQIIEARDGNNYTFIDPTQLPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGIEDNKLRVAVKMLKDSAHSDEREALMSELKILSHLGHHKNIVNLLGAC
TYGGPVLVITEYCSLGDLLNFLRQKAETFEKFVMSIPDITEGSNDYKNVCMERQFIRSDS
GISSTFSSSYLEMRPSRVPNMESSTDCVCEETGDWPLDIDDLLRFSFQVAHGLDFLAAKN
CIHRDVAARNVLLTDHRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYT
VQSDVWSYGILLWEIFSLGKSPYPSVAVDSRFYKMVKHGYQMCQPNFAPAEIYTIMKMCW
NLEPTGRPTFSKISQMIERLHGEQPEQGRLIYQNLQQQVTEGEVSEEPKCCAGPCDQSCD
HREEELPLMKTNNYQFC
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctacctcgctctgctgctggggatcgtggcctctgctgcttcagtggaatgg
aggcgtccggtgatcaagttcaactctaaggtggtgcagagttctgagttggtggtcaga
cccgggacccctctgaatctgaggtgtgagggcgacggacccgtgaactggcaaacgagg
ctcgccaaacacagacgcttcgtgtccaggggcaacgggaaagtccgcaccctaaaggtg
gaacgtccctctgcagaatttacgggaacatacaagtgtgtttacacggcggggtcgcag
aaactcagctcctcagtgcatgtgtacgtaaaagaaccaaaccgtgcattctggaccagc
agcacgtccctacgggtagtgaagaaggagggtgaggaccacctgctgccctgcctgctg
accaatccggcagccacagacttgggcctccgcatggacaacggcacctccgtgccacca
ggcatgaactttacagtttaccggcaccatggtattctcatccagaggcttcacccagga
ttcaatgctgactatgtctgcacagccagggtcagcggagtggaaatgatctccaaagcc
ttttccatctacgtcattcagaagcttcgtttccctccatacgtactcttggagacagat
gaatatgtgcgcattgttggggaggaactcaagattcgctgcacaacacacaaccccaac
ttcaactacaacgtcacctggaaatacaccaccaagtcgaaaccaacaatcgaggagagg
gttcgctctggtggagaaaatcgcctggacatcgagagcatactgaccatccctgctgtg
gaccttacagacacagggaacatttcctgctttggcactaatgaagccggggtgaacagt
tcatcgatttacctgctggttgtggacgatgcctacatcaggctgctgccccagctgtcc
cctaaactagcccatcagggtctttctgtggaagtgaacgagggagaagacctggagctg
accgtgctcattgaagcatacccagagattacagcgcacagatggcacaccccaacacct
cccaacacgtccacacaggagcacaagctcatcagatacaacaacagataccatgctacg
ctaaagcttaagagaatgaatgcacaggagcaggggatatacaccttctatgccaagagc
gacttggccaatgcatccatcacattccaagtccaaatgtatcagagacctgttgctgtg
gtgagatgggagaacacaaccaccctcacctgcacctcattcggctatcctgcccccaaa
atcatctggtaccagtgttttgggatacggcctacgtgcaatgaaaacaccacagggctg
cagctggcgatccctctccaggctcccaccgtggaggtccagagggaggagtacggggct
gtggaggtggagagcgtcctcactgtggggccatccagccggaggatgactgtcgagtgt
gtggccttcaaccgtgtcggcgtcagcagcgacacttttgccatggaggtttctgaaaaa
ctcttcacctccaccttgactggagcagcaggcattctgactatcctccttgtgctactg
gtttttctgttatacaaatataagcagaaacccaggtatgagctccgctggcagatcatt
gaggcaagagatggaaacaactacaccttcattgaccccactcagctgccttacaatgag
aagtgggagttcccaagagacaagctgaagctaggcaagatcctgggcgcaggagctttt
ggaaaggtggttgaggccacagcctacggtctgggaatagaagacaataaattgcgtgta
gctgtgaaaatgttaaaagacagtgcccattcagatgaaagggaagccctgatgtctgaa
ctgaagatcctgagtcacctgggacaccacaagaacatcgtcaatctcctgggagcctgc
acctatggaggaccagtgctggtgatcacagagtactgcagcctcggcgacctcctgaac
ttccttcgccagaaggcagagacgtttgagaagtttgttatgagcatccccgacattacg
gagggctctaatgactacaagaacgtctgcatggagagacagtttattagaagtgacagc
gggatctccagtacattttcaagcagttacttagagatgagacctagcagggtgcccaat
atggaatcatctacagactgtgtgtgtgaggagacaggtgactggccgctggacattgac
gacttgctgagattttcctttcaagtggctcatggccttgactttttggctgccaaaaac
tgtattcatagagacgtggctgctaggaatgtcctcttgactgatcacagagttgccaag
atatgtgactttggcctggcacgggacatcatgaatgactccaactatgtggtgaagggc
aatgcccgtctgccagtgaagtggatggctccagagagcatctttgactgtgtctacacc
gtccagagtgacgtctggtcctacggcatcctcctgtgggagatcttctctttaggcaag
agcccgtaccccagcgtggctgtggactccaggttctacaagatggtgaagcacggctac
cagatgtgccaacccaacttcgccccggctgagatctacacgatcatgaagatgtgctgg
aatctggagcccacagggcgtccgacgtttagcaagatcagtcagatgatagaaagatta
cacggggagcaacccgagcaagggcggcttatctaccagaatttgcagcagcaggtcacg
gaaggtgaagtgagtgaagagcccaagtgctgtgccggcccctgtgaccagtcttgtgac
cacagagaagaggagcttcctctgatgaagactaataactaccagttttgttga
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