Pseudoliparis swirei (Mariana hadal snailfish): 130209311
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Entry
130209311 CDS
T09868
Name
(RefSeq) protein diaphanous homolog 1
KO
K05740
diaphanous 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130209311
09142 Cell motility
04820 Cytoskeleton in muscle cells
130209311
04810 Regulation of actin cytoskeleton
130209311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130209311
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
130209311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Drf_FH3
Drf_GBD
FH2
FH3_FHOD1-3
Drf_FH1
Mis12
CCD48
Motif
Other DBs
NCBI-GeneID:
130209311
NCBI-ProteinID:
XP_056294846
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Position
19:complement(15100857..15138865)
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AA seq
813 aa
AA seq
DB search
MDPHTGNSASAAGPKKDKKAKKNYEDGDGKKKFKLKHLIPDELERFTSMRMKKDKEKPSL
VPGQRHSSAASYETNAPSAVLHDHSDEYVLELFEQMLVDMNLNGEKQQPLREKDITIKRE
MVSQYLHTSKAGQNQKESAKSAMMYIQELKSDYRDTQLLSCLESLRVSLSNNPVSWLQNF
GDEGLALLLNRLRRLQEDKDEYPMMGVKCQHEIIRCLKAFMNNKYGLKSMLESQEGIPLL
VRAINPRVPHMMVDVVKLLSAISILEHPENLHERVLEAITEEAERLDIERFQPLLAGMKN
HNIALKGGCMQLINALISRGEELDFRIHIRSELQRLGLRDLLTEVRMIENEELRVQLTVF
DEQAEDDSEDLKARLDDIRIEMDDVREVFDILVNTVKDSKGETHFLSLMQHLLLIRNDYL
ARPQYYKLIDECVAQVVLHRNGADPDFKCRNLSLNIEGLIDNMVDQTKVETSEAKAAEME
KKLDAELTARHELQVELKKLEGDYEQKLQVLSQEKEQLATSKLEREKESQGLQQQLTTLQ
QQIETLSKDLEEAKTRVVTVPLPPPAPPLPGHNAGIPPPPPPPPMPGYSGIPAPPPPPPL
PGQVGIPPPPPPPPLPGMPGPPPPPPLPGMSGPPPPPPLPGMSGPPPPPPLPGMGPPPPP
PPPGFPGIPPPPPGGPGMPPPPPFGMGGWGVPAAVSLPYGLQPKKEYKPEVQLKRANWSK
IGPEDLSEKSFWTKAKEGKFENDELFAKLTLAFSSQTKTTKGKSITHPLSLSCSFTKPLP
PSSTFPSSTWRTRCTFTLFRNTLSKKLLTHVHE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatccacacacggggaactcggcctcggctgctggtcccaagaaggacaagaaagcc
aagaagaactacgaggatggagatgggaaaaagaagtttaagctcaaacacctgattcct
gatgagttggaacgtttcaccagcatgaggatgaaaaaggacaaggagaagcccagccta
gtgccaggtcagcgacactcttcagctgccagctatgagaccaacgctccgagtgctgtg
ctgcacgaccattctgatgaatacgtgctggaactcttcgaacagatgctggtggatatg
aacctgaatggagagaagcagcagcctctcagggaaaaagacattacgatcaaacgggag
atggtctcccagtacctccacacgtccaaagctggtcaaaaccagaaggagagcgccaag
tcagccatgatgtacatccaggagttgaagtcagactaccgagacacacagctgctgagc
tgtctggaatctctgcgagtctccctcagtaacaaccctgtcagttggctgcagaacttc
ggagacgaggggctcgccttgctgctcaatcggctgagaagactccaggaggacaaagac
gagtaccctatgatgggagtgaaatgtcaacacgagatcatacgctgtttgaaagccttt
atgaacaacaagtacggtctgaaatccatgctggagtcacaagaggggattccgctgctg
gtcagagccatcaaccctcgcgtgcctcatatgatggtggatgttgtcaagctgctttct
gccatctcaatattggagcatcctgagaaccttcatgagcgtgttctggaggccattact
gaggaggcagagagactggacattgagaggttccagccgctccttgctggcatgaaaaat
cacaatattgctcttaagggtggctgcatgcagctaatcaatgccttgataagccgggga
gaagagttggacttcaggatccatattcgctctgaactgcaaagattgggactcagagac
ctgctgacggaggtgcggatgatagaaaatgaagagctgagggtgcaactcacagtgttt
gatgagcaggctgaagatgactctgaggacctcaaagcacgtcttgatgacatccgcatt
gagatggatgatgtgagggaagtgttcgatatcctagtcaacactgtgaaggactccaag
ggcgaaacccacttcctgtccctgatgcaacacctgctgctcattcgcaatgactatttg
gccaggcctcagtactacaagttgatagacgagtgtgttgctcaggtcgtgcttcacagg
aatggagcggatccggacttcaagtgccgtaacctcagtctcaacattgagggcttgata
gacaacatggtggaccagaccaaggtagaaaccagcgaggccaaggcggccgagatggaa
aagaagctggatgccgagttgacggcacgccacgagttgcaggtggagctgaagaaactg
gagggagactatgagcagaagctgcaggtcttgagccaagagaaggaacaactggccact
tcgaagctggagcgagaaaaagagagccagggactacagcaacagctcaccactctgcaa
cagcagattgaaacgctctctaaagatctggaagaggccaagacgagagttgttactgtt
cctctgccaccacctgcccctcctctccctggacacaatgcaggtataccccctccacct
cctcccccacctatgcccggttattcaggcatacctgctcctccaccccctcctccttta
ccgggtcaagtcggtattcctcctccacctcccccgcctcctttaccaggcatgccagga
cctccaccacccccgcccctccctggcatgtcaggacctccaccacccccgcccctccct
ggcatgtcaggaccgccaccccctccacccttacctgggatgggacctccaccaccacca
ccacctcctgggtttcccggtatccctcccccaccaccgggcggcccaggtatgccgcca
cctccaccatttggcatggggggctggggggtccctgcagcagtctcactgccttacggg
ctccagcctaagaaggaatacaagcctgaagtccagctgaagagagccaactggagcaag
atcggacctgaagacctctctgagaagagtttctggaccaaggcaaaggaggggaaattt
gaaaacgatgagctctttgccaaactcacgttggccttctcctcacagacaaagaccact
aaaggtaagagtatcacgcacccactttcattgagttgttctttcacaaagcctctcccg
ccttcctcaaccttcccttcctcgacttggaggacacgctgcacatttacattattcagg
aacactttgtcaaaaaagcttctcacacacgttcatgaataa
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