Pseudoliparis swirei (Mariana hadal snailfish): 130209316
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Entry
130209316 CDS
T09868
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209316 (npas4a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130209316 (npas4a)
SSDB
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Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
130209316
NCBI-ProteinID:
XP_056294852
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Position
19:18004904..18008825
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AA seq
920 aa
AA seq
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MYRSTKGASKARRDQINSEIRILKDLLPISDADKARLSYLHIMSLACMYTRKSVFFTQDA
GTSLAESALSFQELSELMETLPGFLMLLTGEGRLLYLSDSVSEHLGHSMVDLVAQGDSVY
DIIDSSDHFIMRNNLSTSTSPEMDRLFRCHFNTSKSVRRQSAGNKLVLIRARCLSPLAAS
PGSYWTSNTVWVCFCSPLEPHPSLSGPEEERESSSTTPLAETNLFLACFHSQHGRDMRLQ
TAQDSVSGYLGFDVTALRSCSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVVRVQTQD
QSWIWLYMVLQLQPGEIPINSNNYIISESEAWSVRQQLSSEHTQLTLVLSGGASQHEGLS
LQSPDTLSSPDQVFTPGSSGLSAQSFDFSTAGCSVGSSDEPGSSAAEAMQLEGDPRSSIS
SLEEESFFQQHPAERPSAASSPTPVTVETVADLDFLTQNILLPPSFQLNPPLPPLPPIPT
SQDQQTKELVCTPPYTPHVIGASFPFGEPLFSFDPSGTTTPPLSSTTATSTTSMAPSASS
SAPPTTGSSPSPLNTLSTKLALKLATPSTDFLFSGEHGSGALYEKLPPTPDSPGDGDCTV
MTLPEVRGPLYVNVPLGPLQCPPEGLLTPEASPGKQPCLSFFSLERERERAEISLLAQHI
SSLAEGFYLDPLLSKLSPPSMSPSSSPFLSPTIETADVDSVHMLREFYPIKAWRGLDIPM
FLDDDDSLFEENILENLLQDNFLPSQSPSLSPPSPSTSPIPNPCSPISSQTPVCWRQPSQ
FEGAGHFCSVQSAQCNCMAGGGATAAEAMEEGEGTAEEAMEIEVVSSSPVSSCSSILASP
PLILTASPSPATSTPIGSPMPAVSCNQSLLEELAVMEPMFGAGASITPGLGQQPELYQLQ
CHPSAQCFHKDGSGSSSVLK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggagcatccaaggctcggcgggaccagatcaactccgagatc
cgcatcctgaaggacttgttgcccatatccgatgcagataaagcgcggctctcatacctg
cacatcatgtcgcttgcctgcatgtacaccaggaaatccgtcttcttcactcaagatgcg
ggaacgagtctcgctgagagcgctctgtctttccaagaattgtcggagttgatggagacg
ctgccggggtttctgatgctgctgactggggaagggaggctgctgtacctgtcagacagc
gtctccgagcacctcggacactccatggtggatcttgtggcacagggggacagcgtgtat
gatatcatcgattcctcggaccattttatcatgaggaacaacctgtcaacctccacgtca
cctgagatggaccgtctcttccgctgtcatttcaacacctccaagtctgtgcggaggcag
agtgctgggaacaagctggttctgatccgagcccgctgcctctctcccctcgccgcctcc
cctgggtcctactggacatccaacacagtctgggtgtgtttctgctcccctctggagccc
cacccatctctctccggccccgaggaagagagggagtcatcctccaccacacctctagct
gagaccaacttgttcctggcatgcttccactcccagcatggccgggacatgaggctgcag
actgcccaggacagcgtgagcggctatctcggctttgatgtgacagctttacgctcttgc
tcctggtacagcctcctccacccacaggatctgtcacatgcctccgctcagcaccgcagc
ctattgagagaaggaggagagggcagagctgaaatggtggtgcgtgtgcaaactcaagac
cagtcgtggatttggctctacatggtgcttcagctgcaacctggagaaatccccatcaac
agcaacaactacattatcagtgagtctgaggcctggtcagtgcgtcagcaactcagctct
gagcacacccagctgaccctggttctgagtggtggggcttctcagcatgagggtctgagc
ctccagtctccagacaccctgtccagtccagaccaggtcttcaccccaggcagcagcggc
ctgtcagcccagtcctttgacttcagcactgctggctgcagtgtgggctcctctgatgaa
cctgggagctctgctgccgaggccatgcagctggagggggaccctcgttccagcatctcc
tctctggaggaagaaagcttctttcagcagcatcctgctgaaaggccctccgctgcctcc
tcccccactccagtcactgttgaaactgtggcagacttagactttttaacccagaacatt
ctcctgccgccatccttccagctcaaccctccactgccgcctctcccccctatccccacc
tctcaagatcagcagaccaaagagttggtgtgcacgccaccctacactccccatgtcatt
ggggctagcttcccattcggcgagcccctctttagcttcgatccctctggcactaccact
ccacctctctcttctacaacagccacctccaccacctcaatggccccttcagcttcctcc
tcagccccaccaactacgggctccagcccctctcccctgaacaccctgtccaccaagctc
gccctcaagctggctactccatccactgacttcctcttttctggcgagcacggcagtggt
gccctttatgagaaactgccccccacacccgacagccccggagacggcgactgcacagtg
atgaccctgcctgaggttcggggtccgctgtatgtaaatgtaccactagggcccctccag
tgtccacctgaaggcctcctcacacctgaggcatcacccggtaaacagccctgcctctcc
ttcttctccctggagagagagagggaaagagcagaaatctccctcttagctcagcacatc
agctccctggcagagggattctacctggatccactcttgtccaaactctctcctccctcg
atgtcaccctcctcctcccccttcctgtctcccaccatagagactgccgatgttgattca
gtccacatgcttagggagttttatcccattaaggcatggagaggtctggacattcccatg
tttctcgatgatgatgactctctgtttgaagagaacatcctagaaaaccttctccaagac
aacttccttccctctcagtcccccagcctctcccctccctccccttccacctcccctata
cccaatccatgcagcccaatttcttctcaaaccccagtgtgctggcgccaaccctcccag
tttgagggagcgggccacttctgtagcgtccaatcggcgcaatgtaactgcatggctggg
ggcggggcgactgcggctgaggcaatggaggaaggggaggggacagcggaggaagcaatg
gagatcgaggtggtgtcatcatctcctgtgtcctcttgctcctccatcctagcttcccct
cccctcatcctcactgcctcccccagccccgccacctccacgcccatcggctcgcccatg
cccgctgtatcttgcaatcagtccctcctggaggaactggctgtcatggaacccatgttt
ggggcaggtgcctcgatcacccctggcttagggcaacaacctgagttgtatcaactccaa
tgtcatccatcagcacagtgcttccataaagatgggagtggaagttcctctgttctaaaa
taa
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