Pseudoliparis swirei (Mariana hadal snailfish): 130209318
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Entry
130209318 CDS
T09868
Symbol
tmtops3a
Name
(RefSeq) LOW QUALITY PROTEIN: teleost multiple tissue opsin 3a
KO
K04256
c-opsin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130209318 (tmtops3a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130209318 (tmtops3a)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130209318 (tmtops3a)
G protein-coupled receptors [BR:
pswi04030
]
Rhodopsin family
Vision
Opsin
130209318 (tmtops3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
130209318
NCBI-ProteinID:
XP_056294854
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All DBs
Position
19:complement(18803920..18809973)
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AA seq
283 aa
AA seq
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MVKRFHSLLTGVQAQVKNIHGNMTAVWSLSILSYERYTAVLRPSQVDVSDFRKTWLCXGG
SWLYSLLWTMLPFLGWSSYGPEGPGTTCSVQWHLRSATSVSYVLCLFIFCLLLPFLLMVY
SYGRILVTIRRVGKINLLAAQRREQCILAMVLSMVSCYMLCWMPYGTMALMATFGRSGLV
TPMASVVPSVQAKFSTVINPVIYMFFNNQFYSCFVAFIKCSTEPESVHGEEQPTSRTRFS
GFFLVRRPPSLSSSQRQILGGSRSAALCSRHKDQHTLVVHYTP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcgcttccattcactccttacaggcgtccaggctcaagtcaagaacatccac
ggcaatatgacagccgtctggtccttgtccattctctcctatgagcgctacaccgccgtg
ctgcgtccctcgcaggtcgacgtctcagacttcaggaagacctggctctgtnncggcggc
tcctggctctactctctcctctggaccatgctgcccttcctgggttggagcagctacgga
ccggagggccccggtaccacgtgctccgtccagtggcacctccggtccgccaccagcgtc
tcgtatgtgctgtgtctcttcatcttctgcctgctgctgcctttcctgctcatggtctac
tcttatggacgaatcctggtgacaatcaggagggtgggtaagatcaatctgttggccgct
cagcgcagagagcagtgcattctggccatggtgttgtccatggtgtcctgctacatgctg
tgctggatgccctacggcaccatggcgctgatggccaccttcggtaggtctggactggtc
actcccatggcgagtgtggttccctctgtccaggccaagttcagcactgtcatcaacccc
gtcatctacatgttcttcaacaaccagttttacagttgctttgtggccttcataaagtgc
agcacggaacccgagtctgttcacggagaggagcagccaacttccaggactcggttctcc
ggcttcttcctcgtccgcaggcctccctccctcagctcttcgcagcgtcagatcctcggc
ggctccaggagcgctgccctctgcagccggcacaaggaccagcacactctcgtggtccac
tacactccttaa
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