Pseudoliparis swirei (Mariana hadal snailfish): 130209352
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Entry
130209352 CDS
T09868
Name
(RefSeq) transcription factor COE3-like isoform X1
KO
K09103
early B-cell factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209352
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130209352
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
130209352
NCBI-ProteinID:
XP_056294909
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Position
19:complement(27706431..27831160)
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AA seq
560 aa
AA seq
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MFSIPDSLPRGALTMKEEPLPTGMTPVRSWMQGAGILDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSYIDFVEKDKEYNGEKTNNGIHYRLQLLYSNGI
RTEQDLFVRLIDSMTKQPILYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTTVNVDGHVLSVSDNMFVHNNSKH
GRRARRLDPSEAATPCIKAISPSEGWTTGGATVILIGDNFFDGLQVVFGTMLVWSELITP
HAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHP
GDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADLTEALYSVPRSHNQLPSLTGS
AHSGMMGVNSFSSQLAVNISEASQADQGYSRNSNSVSPRGYVPSSAPQQANYNTITSSMN
GYGAGMTNLGGPGSPSFLNGSANSAYASPYSFSPVHMVSAVKQKSAFAPVVRPQSSPPPT
CTTANGSNLQAMAGLIVPPM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgttctccatcccggacagcctcccccggggggccctgaccatgaaggaggagccgctc
cccaccggcatgaccccggtccgctcctggatgcagggcgcggggatcctggacgccaac
acagcggcacagagcggcgttggtttagcccgcgctcacttcgagaagcagccgccctca
aacctccggaagtccaacttcttccacttcgtgctggcgctgtacgacaggcaaggtcag
ccggtggagatcgagaggacgtcgtacatcgacttcgtggagaaagacaaggaatacaac
ggagagaagaccaacaacgggatccactacagactacagctcctctacagcaacggcatc
aggacagaacaggatctttttgtccggctgatcgactccatgaccaaacagcccatcctc
tacgaaggtcaggataagaacccagagatgtgtcgggtcctcctcacccacgaaatcatg
tgcagccggtgttgtgacaagaagagctgcgggaaccgcaatgagacgccgtccgacccc
gtcatcatcgacaggttcttcctcaagttcttcctcaagtgcaatcagaactgtttgaaa
aatgcaggaaacccgcgagacatgaggaggttccaggtggtcatctccactacggtcaac
gtggacggacacgtgctgtcggtgtcagacaacatgttcgtccacaacaactccaaacat
ggccgccgcgcccgacgcctggacccctctgaagcagccacgccctgcatcaaagccatc
agcccgagcgagggctggacgaccggcggcgccaccgtcatcctcatcggggacaacttc
ttcgacggcctgcaggtcgtcttcggcaccatgctggtctggagcgagctgatcacccct
cacgccatccgggtccagactccccctcgccacatccctggggtcgtggaggtcacgctg
tcctacaaatccaaacagttctgcaaaggagcgccgggacgcttcgtctacaccgccttg
aacgagcccaccatcgactacggcttccagaggttacagaaggtcatccctcgccacccc
ggggacccggagaggttacctaaggaggtgctgttgaagcgagcagccgacctggtggag
gctctttacgggatgccgcacaacaaccaggagatcatcctgaagcgggccgctgacctc
accgaggcgctctacagcgtccctcgcagccacaatcagctgccgtccctcacaggctcc
gcccactctgggatgatgggcgtgaactccttcagcagccagctcgccgtcaacatctca
gaggcctcgcaggccgaccagggttactcccgtaactcgaacagcgtgtctccccgcggc
tacgtgccgagctccgccccccagcaggccaactacaacaccatcacgtccagcatgaac
ggctacggggccggcatgaccaacctggggggccccgggtcccccagcttcctcaacggc
tccgccaactccgcctacgcaagcccttactcattctctcctgtccatatggtttctgca
gtcaaacagaagagcgccttcgcccccgtcgtgcggccacagagctccccgccccccacc
tgcaccaccgccaatggcagcaacctccaggctatggcaggtctcatcgtccccccgatg
tga
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