Pseudoliparis swirei (Mariana hadal snailfish): 130209359
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Entry
130209359 CDS
T09868
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209359
04121 Ubiquitin system [BR:
pswi04121
]
130209359
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130209359
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130209359
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
130209359
NCBI-ProteinID:
XP_056294921
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Position
19:complement(3771689..3773577)
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AA seq
405 aa
AA seq
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MRSPVLQTRPLYGSHTGSHLAQVLTQAVEEWKIKRPTTNIPVTTDNAKNQINAVNEAGLG
PQIGCFAHVVNLASQKGISVNRMDRLLGRIRKVVSYFHRSTTAAHVLKTRQEMLKLPTHK
LIHDVPTRWNSTYDMLERYLEQQAAIYSALTDKTLKKNVKDIITLSDDDVRVAEEVLQVL
KPLKTVTSLLSTETLPSVSMILPLKTRILQSMAPSVEDSTITQDVKTAIREDLKPRYTSP
PTLQDYLHRSTALDPRFKSLSHIDPDLRQRTYSDLTTEIVSSLATEDCDEGQAAEPTGAN
LDTSPPQKKSALAEHFGETFASKDMDSKTPADIKEEVAFYLAASGIAVDGDPLTWWKSNE
FKYHHIAKMARCYLAVPGSSVPSERVFSTAGDIVTAKRSTLSQTM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtccggtgctgcagacacgccccctctacggaagtcacacaggcagtcacctt
gcgcaggtactgacacaagcagtggaggaatggaagataaagaggcccactactaatatc
ccagtcacaactgataatgccaaaaatcaaataaatgcagtgaatgaggcaggactgggc
ccacagatagggtgctttgcacatgtagtaaatttggcatcacagaagggaatctcagtc
aataggatggaccgcctccttgggaggatcaggaaggtggtttcctacttccacagaagc
acaacagctgctcatgtgcttaagacaaggcaagaaatgctaaagctgcctactcataag
ctcatacatgatgtcccaacaaggtggaactccacttatgatatgttagagcgttatctg
gagcagcaggcagctatatactctgcattgaccgacaagaccctaaagaaaaatgtcaaa
gacatcataaccctttctgatgatgatgtgagagtggcagaggaggtcctccaggtgctt
aaaccccttaaaactgttacatctctgctgagcactgaaacgttaccatctgtgtcaatg
atccttccgctgaaaacaaggattctacaatccatggctccaagtgtggaagacagcacc
atcactcaagatgtcaagactgccattagagaggacctgaagcccagatacacttcaccc
cctactctacaggactacctccacagatctactgccctggatccaaggtttaagtccctg
tctcacatagaccctgacctacgccagaggacatacagtgacctcaccactgagattgtg
agcagtctggccactgaagactgtgatgagggtcaagctgcagagccaacaggagcaaac
ttggacacatctcctccacaaaagaagtcggcgttggcagagcattttggagagaccttt
gccagcaaagacatggacagcaagactcctgctgacatcaaagaggaggtggcattctac
ctggcagcaagcggcattgcagtggatggtgatccactgacatggtggaaaagcaatgag
tttaaataccatcatattgctaagatggcaagatgctatctcgctgtgccaggctcttca
gttccttccgagagagtgttctcaacagcaggggacatagtgactgcaaagaggtccaca
ctctcccagacaatgtag
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