Pseudoliparis swirei (Mariana hadal snailfish): 130209466
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Entry
130209466 CDS
T09868
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130209466 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130209466 (uvssa)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
130209466 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
LBD_receptor
DUF3887
NUP120_helical
Motif
Other DBs
NCBI-GeneID:
130209466
NCBI-ProteinID:
XP_056295118
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Position
19:10899372..10942282
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AA seq
729 aa
AA seq
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MVMELPQRDRLSELVEQLTTSGEPQLNQDRMKEIKKICKVSNDCIDHVYHSVIAQLNQEH
AEVRLSAFQIASELFSRSHHFRMLLVDNFQEFLELTVETDSEQPLPPPKEVARRLRSLAI
QTVQSWQTSYGAAYKKLALGYHFLKQVKKVDFQDAEARTQAERRREEERQRKMEIIYKER
VEAASKDMDESYQEIEATLTEMESCMSLLFPEFDMIDIQNTKSSPPSSQSANECPSVEEP
PCCSKDLKKEQSKEEKKSNWERMKEEEGKRKAEESEESSEEEDGETLDEDLFIRNSGLIS
HAYSLDLNFSFGLRVKETEDNEAVVSTVKDLHRLITNKHLPALQGWVQIFTKSGAEQQLL
RRALDLKSSLEATLQKHQELHIDYKTRVRKVAASDGENDDDDDDDDDDDFYEVPEKEGYE
PHIPEHLRAEYGLDPAPSTSTPPITKNPPAPRPLCSSSFSSSSSRRLKRLTEEEQDPTCA
AATLRHLKQNLPVLPLSSSSSSGPSSSQSSSDQKAIDAPVVPFGLDLYYWGQEQPNAGKI
IKMSSQHQFWVPVDVVEEVENKELLAESRSRCISFPGSFTPVNHYCSAPLGNGKLCQRQD
RLKCPFHGTIIPRNQEGQPCRQEDRLREEQEKWRKREEQPDWRDAELMRDIEATTGENLG
SDRVGKKGKGKKKKYPNLSDLKQSANTARSRLEKKVFNKSSMRRIAEVMAKADKRKHEKF
SNQFNYALQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaattgcctcagagggacaggttgtcagagctggtggagcagcttaccaca
tcaggagaaccccagctcaaccaggacaggatgaaggaaatcaagaagatctgcaaagtg
tctaatgactgcatagaccacgtgtaccactcggtgatcgctcagctcaaccaagaacat
gctgaggtccgactgtctgccttccagatagccagtgagctcttttccagatcacaccac
tttagaatgctgctggtggacaacttccaggaattcctggagttgacggtagagactgac
tcggagcagccccttccccctcctaaggaagtagccagaagacttaggtcactggccatc
cagacggtccaatcatggcagacctcttatggggcagcttataagaagttagcactgggc
taccactttctcaaacaggttaagaaggtggacttccaggatgctgaggccaggacacaa
gcagagaggaggagggaggaggagagacaaaggaaaatggaaattatttacaaggagaga
gtggaggcagcctcaaaagacatggatgagtcataccaggaaattgaggcaacattgaca
gagatggaatcctgcatgagcctgcttttcccagagtttgacatgatcgacatccagaac
accaagagcagccctcccagctcccaatcagccaatgaatgtccatcagttgaggaacct
ccctgctgcagcaaagacctgaagaaggagcagagcaaagaagaaaagaaaagcaattgg
gagagaatgaaggaagaggagggtaaaagaaaagcggaagagtcggaggagagtagtgaa
gaagaggacggggagactcttgatgaagacttgtttattcggaactctgggctcatctct
cacgcctacagtctggatctgaacttcagttttggtctccgtgtgaaggagacagaggat
aatgaggcagtggtttccacggtgaaagacctccataggttaataacaaacaaacaccta
cctgctctgcagggctgggttcagatcttcaccaagtcaggtgctgagcagcagctgtta
aggagagcgctggatctgaaaagctctttagaagctaccctacagaaacaccaagagctt
cacattgattacaagaccagggtccgcaaagtggctgcctcagacggagagaatgatgat
gatgatgatgatgatgatgatgatgacttctatgaggttccagagaaagagggatatgag
ccccacattccagagcatctacgagctgaatatggtctggatccagctccttctacttca
acaccaccaatcacaaagaatcctcctgctcctcgacctctgtgctcctcctccttttcc
tcttcttcctccaggcggctgaagcgtcttacagaggaggagcaggatccaacatgtgca
gctgccacactgcgtcacctcaaacagaacctccctgtgctcccactatccagcagcagc
tcttcaggtcccagttcatctcagtccagctcagaccagaaggctatcgatgctcctgtg
gttccatttggtttggacctgtactactggggccaggaacagcccaacgctggcaagatc
atcaaaatgtcctctcagcatcagttctgggttcccgttgatgtggtagaggaggtggag
aacaaggagctcctggcagagagcaggagtagatgcatctccttccctgggagcttcact
cctgtcaaccattactgcagtgctccactgggcaacggaaagctgtgtcagagacaggac
cgcctcaagtgtcctttccatggtaccatcattcccagaaatcaggaggggcaaccctgc
agacaagaggatcgactgagagaggagcaggaaaagtggaggaaaagggaggagcagcct
gactggcgcgatgcagagctgatgcgagacatcgaggcaacaacaggggaaaacctgggt
tccgacagagtgggtaaaaaagggaaaggaaagaagaagaagtaccccaacctcagcgac
ctgaagcagagtgcaaacacggcccgctcgaggctggagaaaaaagtcttcaacaagagc
agcatgcgcagaatagctgaagttatggctaaagctgacaagagaaaacatgaaaagttc
tccaaccaatttaactatgccctccagtga
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