Pseudoliparis swirei (Mariana hadal snailfish): 130209512
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Entry
130209512 CDS
T09868
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130209512
04082 Neuroactive ligand signaling
130209512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130209512
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130209512
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
130209512
NCBI-ProteinID:
XP_056295198
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Position
19:16101941..16118120
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AA seq
563 aa
AA seq
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MNFSGKLTLVLLLVLLAAQGCFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLIKVDEVNQIMETNLWLRHVWNDYKLKWAPVEYDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDVPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVMLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPEWVRSVFLGVLPRVMLMRRPIDQGCFSPA
NMTGGTGRGRSSVRNRKRKNSIGGGSGTGSVSIGGITGGVALDVGAGGGPAAPAAGSMNC
VEYGELNRDMNRRCLYRGKEVPTPVPPSMVPPPPPPPPPPPNAPPTQGPQESELPKVLRP
LNAPSPVSAIVAFSVVSPEIKQAIESVRYIAENMRTRNKAKEVEDDWKYVAMVIDRIFLW
VFVTVCVLGTVGLFLQPLISFFR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctccgggaaactaacactcgtcctcctgctggtgctcctcgcagcgcaaggc
tgtttttcatctaagggagaggacagattatttcggaggttgttcaggaggtacaaccag
ttcatccgaccagtggagaatgtatccgatccagtcacagtggagttcgaggtctccata
tctcaactgatcaaagtggatgaggtgaatcaaattatggaaaccaatctgtggctgaga
cacgtctggaacgactacaaactgaaatgggcccctgttgagtacgatgggattgagttc
atacgagttccctccaataaaatttggaggccggacattgttttgtacaacaatgctgtc
ggggacttccttgtggaagacaagaccaaggctctgctgaagttcgatggcaccatcacc
tggattcctccagctattttcaaatcctcctgccccatggatatcacctactttcccttt
gactaccagaactgctccatgaagtttggctcctggacgtatgacaaggcaaagatcgac
ctggtgctgatcggctcaaaggtcaacttgaaagacttctgggaaagtggagagtgggag
atcatagacgtgccaggatacaagcatgacatcaagtacaactgctgcgaggagatctac
ccggacataacctactccttctacatccgccgcctgcctctcttctacaccatcaacctc
ataatcccctgcctccttatctccttcctcacggtgctggtcttctacctcccgtctgac
tgcggcgagaaggtcaccctctgtatctccgtcatgctttctctcactgtgttcctgctg
gtcatcactgagaccattccttcgacgtcgctcgtcatccctctgatcggcgagtacctc
ctcttcaccatgatctttgtcacgctcagcatcgtcatcactgtctttgtgctgaacgtc
cactaccgcacccccatgactcacacgatgccggagtgggtgaggtctgtgttcctcggg
gtgctgcccagggtgatgctgatgaggaggcccatcgaccagggctgcttctccccagca
aatatgacaggagggaccggaagaggacggagtagcgtgagaaacagaaagagaaagaac
agcataggaggaggaagtggcacgggaagtgtaagcattgggggtataactgggggtgtg
gcgttggatgtcggggcaggaggaggacctgctgccccggctgctggctccatgaactgt
gtggagtatggcgagttgaaccgggacatgaacaggaggtgcctctacagaggaaaagag
gtaccgactcctgtccctccctcgatggtgccacctcctcctcctcctcctcctccaccc
ccaaacgcacccccaacccaggggccccaggagtcagagttgcccaaggtgctgcggccg
ttgaatgccccttcgcctgtcagcgctatcgttgccttctccgtggtgtcgccagagatc
aagcaagccatcgagagcgtacggtacatcgcggagaacatgaggactcgcaacaaagcc
aaagaggtggaggacgactggaagtacgtagccatggtcatcgacaggatcttcctctgg
gtttttgtgacagtgtgtgtgttgggaacagtgggactcttcctccagccacttatcagc
ttcttcagatag
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