Pseudoliparis swirei (Mariana hadal snailfish): 130209531
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Entry
130209531 CDS
T09868
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130209531 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130209531 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130209531 (gpc4)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130209531 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130209531 (gpc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
130209531
NCBI-ProteinID:
XP_056295234
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Position
19:4570553..4606610
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AA seq
562 aa
AA seq
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MKTLSVLCVCTLVVLSGSMTAEQKLKNCNDVRAAYSSKGFNVNDVPNKGVNGAPLKVCPQ
GFSCCTLEMEEKLSQQSHTEIKAPVSQLSTNLQSTFRQRHDHFDSFFRELLKNAEVSLHN
MFVRTYGMMYVQNAELFKNFFEALTQYYESGGATVNLDSMLSDFWADLLERMFRLVNGQY
EFGDAYMECVSRHTEQLQPFGDVPRKLRIQLMRAFVAARTFVRGLALMPEVVSRVSTVTV
SPSCVRAAMKMLYCPYCSGQVALKPCQNYCLNVLRGCLANQADLDAEWNNFLDAMLSLAD
RLEGPFNFESVMDPIDVKISEAIMNMQENSMQLSHKVFQGCGQPKPSVALRSKRSIKDTS
FNGRFRPYSPDARPTTAAGTSLDRLTIDVKKKLKHAKKFWSTLPETVCAGERIAPGDDCW
NGTAKSSYESVVIGNGLANQVSNPDVDVDITKPDTVIRSQIAVLKEMTSWLKAAHSGNDI
SVDNDEDSSGGGGEESGSGCDSPSCDTDQDIYFSTPPNPGKPADEQRVKSRGPSAGGPAA
ATGSTALALCGLALALLAPHLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgtcggtgctgtgtgtctgcacgctggtcgtgttgtccgggtcgatgact
gcggagcaaaagttgaaaaactgcaacgacgtgcgcgcggcgtacagctccaaaggcttc
aacgtcaacgacgtccccaacaaaggagtcaacggcgccccgttgaaagtgtgtccgcag
ggtttctcctgctgcacgctggagatggaggagaagctgagccagcagagccacacggag
atcaaagcgcccgtctcccagcttagcaccaacctacaatccaccttcagacagcggcac
gaccactttgacagctttttccgcgagcttttgaaaaacgccgaggtctcgctgcacaac
atgttcgtgcggacctacggcatgatgtacgtgcagaacgccgagctcttcaagaacttc
ttcgaggcgctgacgcagtactacgagtcgggcggcgccaccgtcaacctggactccatg
ctgtcggacttctgggcggacctcctggagcgcatgttccggctggtcaacggccagtac
gagttcggcgacgcctacatggagtgcgtcagccggcacacggagcagctgcagccgttc
ggcgacgtgccgcgcaagctccgcatccagctgatgcgggccttcgtggccgcgcggacg
ttcgtgcgcggcctcgcgctcatgcccgaggtggtcagccgagtgtccacggtcactgtg
tctcccagctgcgtgcgagcggccatgaagatgctgtactgtccctactgctcgggccaa
gtggcgctgaagccgtgccagaactactgtctgaacgtgctgcgggggtgtctggccaac
caggccgacctggacgccgagtggaacaacttcctcgacgccatgctcagtctggcggat
cggctcgagggtccctttaacttcgagtccgtcatggaccccatcgacgtgaagatttcg
gaggccatcatgaacatgcaggagaacagcatgcagttgtcgcataaggtgttccaagga
tgcgggcagcccaagccgagcgtggccctccggtccaaacgctccatcaaagacacgagc
ttcaacggacgcttccggccctacagccccgacgccagacccacgaccgccgccgggacc
agtttagaccgattgacgatcgacgtgaagaagaagctgaaacatgcaaagaagttctgg
tccacgttgccggagaccgtttgtgcaggcgagaggatcgcacccggggacgactgctgg
aacggaacggcaaagagcagctacgagtccgtcgtcattggcaacggcctggccaaccag
gtgtcgaaccccgacgtggacgtggacatcacgaagccggacacggtgattcgcagtcag
attgcagttttaaaggaaatgacgagttggctcaaagcggcgcacagcggcaacgacatc
tccgtcgacaacgatgaggacagcagcggcggcggcggcgaggagagcggaagcggctgc
gactccccgtcctgcgacacggaccaggacatctacttctccacgccgcccaaccccggc
aagcccgccgacgagcagcgggtgaagagcaggggcccgtcggccgggggccccgccgcc
gccacgggaagcacggcgctggcgctctgcgggctcgccctggcgctgctcgccccccac
ctgagataa
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